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Protein Overview: LPXB_SHEON

General Information:
Name(s) found: LPXB_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Lipid-A-disaccharide synthase OS=Shewanella oneidensis (strain MR-1) GN=lpxB PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid A biosynthetic process [ISSLink to PubMed article]
    Molecular Function: lipid-A-disaccharide synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKSQLVFA MVAGELSGDI LGAGLMAALQ KTHPNARFVG IGGPRMEALG FESLFAMEEL  60
   61 AVMGIVEVLS RLPRLLHVRA SLIKSITELK PDCFIGIDAP DFNIGLELKL KAQGIKTVHY 120
  121 VSPSVWAWRP KRIFKIAKAT NMVLSLLPFE KAFYDKHQVP CTFVGHTLAD DIPLESDKAC 180
  181 ARQVLELDQE AEYLAILPGS RGGELKQLAE PFVKAALLIK QQFPDIRFVT PLVNQKRREQ 240
  241 FEQALKDHAP DLEIHMVEGK SREVMAAADG ILLASGTATL EAMLIKRPMV VAYRVSPLTY 300
  301 SIAKRMMQVN RFSLPNLLAG CDVVPELIQH DCTPEKIAAA VGVELNRDFA PIKAEFERLH 360
  361 QVLRCDASQK AAEAVLALVD FKEVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..385] PSI-BLAST 46.69897 Crystal structure of UDP-N-acetylglucosamine_2 epimerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring hexosyl groups
    		•  3.04530122157712 bayes_pls_golite062009
  • catalytic activity
    		•  3.02192459767177 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.94500176353224 bayes_pls_golite062009
  • glycogen phosphorylase activity
    		•  2.09116455393465 bayes_pls_golite062009
  • lipopolysaccharide heptosyltransferase activity
    		•  2.03374890992046 bayes_pls_golite062009
  • glucosyltransferase activity
    		•  1.8062586862583 bayes_pls_golite062009
  • transferase activity
    		•  1.67770954408305 bayes_pls_golite062009
  • UDP-N-acetylglucosamine 2-epimerase activity
    		•  1.63103907245982 bayes_pls_golite062009
  • UDP-glucosyltransferase activity
    		•  1.4199532885636 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  1.30934991061674 bayes_pls_golite062009
  • glycogen (starch) synthase activity
    		•  0.435616523537281 bayes_pls_golite062009
  • phosphorylase activity
    		•  0.431662083250969 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.27693350081385 bayes_pls_golite062009
  • alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
    		•  0.22009679964126 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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