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Protein Overview: UPPS_SHEON

General Information:
Name(s) found: UPPS_SHEON [Swiss-Prot]
Description(s) found:
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  • gi|24373201|ref|NP_717244.1| undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347422|gb|AAN54688.1|AE015609_7 undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) OS=Shewanella oneidensis (strain MR-1) GN=uppS PE=3 SV=1 [Swiss-Prot]
  • undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1]gi|24347422|gb|AAN54688.1| undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1]gi|42559986|sp|Q8EGH1|UPPS_SHEON Undecaprenyl pyrophosphate synthetase (UPP synthetase) (Di-trans-poly [nrdb_11152004_Chlamydomonas]
  • undecaprenyl diphosphate synthase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: di-trans,poly-cis-decaprenylcistransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTVEFDPQ SRPTEADAYA QTSLPEVLPE LVKQSLPKHV AIIMDGNGRW AQTQGKPRVM  60
   61 GHKAGVKAVR RAVSAASQLG IQSLTLFAFS SENWRRPDKE VSLLMELFFT VLQREIKLLD 120
  121 KNQVKLNIIG DISRFSARLQ KQIRAAEEKT AGNSGLILNV AANYGGRWDI LQAAQKLAEK 180
  181 VETGEMTSSQ FTEEALSEHL CMQNQSEVDL IIRTGGDYRI SNFVLWQAAY AELVFLDTLW 240
  241 PDFDEQAFHE AIATFANRQR RFGLTGSQID EMRAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] PSI-BLAST 94.30103 Undecaprenyl diphosphate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  4.27318114514627 bayes_pls_golite062009
  • di-trans,poly-cis-decaprenylcistransferase activity
    		•  3.07573514495519 bayes_pls_golite062009
  • catalytic activity
    		•  0.878978773660153 bayes_pls_golite062009
  • binding
    		•  0.458704366412361 bayes_pls_golite062009
  • transferase activity
    		•  0.273947729320601 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  0.256467886977999 bayes_pls_golite062009
  • protein binding
    		•  0.11675780767527 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle