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Protein Overview: gi|24373150, gi|...

General Information:
Name(s) found: gi|24373150 [NCBI NR]
gi|24347355 [NCBI NR]
Description(s) found:
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  • gi|24373150|ref|NP_717193.1| TonB-dependent heme receptor [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347355|gb|AAN54637.1|AE015604_1 TonB-dependent heme receptor [Shewanella oneidensis MR-1] [NCBI NR]
  • TonB-dependent heme receptor [Shewanella oneidensis MR-1]gi|24347355|gb|AAN54637.1| TonB-dependent heme receptor [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • TonB-dependent heme receptor [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 737 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: heme transport [ISSLink to PubMed article]
    Molecular Function: heme transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYQPKIGIS KTMIGCLGLC ALPALPLNAK EVLGAPKVEP IEILTVHGQQ YRRATTMTKP  60
   61 GEAIISMAEI EEMQATTFAE VIDDMAGAHI DGGTRSGGER INVWGFGETE DFNVYVDNAP 120
  121 VGFEQYRYGS FFLDPDLIKR VEVIKGAHDV RSGNGGFGGA MYVVTKSADD FLKYDQSVGA 180
  181 RVKASYASNN DAQSYTGTVY GRANQQLSGL LHFTRRDAQD VTLANGEAFE YSGYEQNNYL 240
  241 GKVDYEQGDH QLMLSVTHYL DEGRKPWANR RGPMPAISDF NIRKYGSYEQ ALYATTAYNT 300
  301 YEDNTWSANY RYSPSNPLID TQIVVSHSAN ARHWIRPPIA WEKMTVSVGN FGHESWLDYK 360
  361 RDYIDINNLS VVGAHEITAG LQFRSLDRTS LVFNKSYEKN PEKNFGWYTP YYQPEGRQDT 420
  421 YAAYLRDAIS LTDDLTITPS LRYDFVYSVG KPNIAPDYND IAAGHDYSST HHSGFSPRLG 480
  481 VDYQLTPNTR VNFDYAYSLQ APVVDEIYAV QYAKASITAT SRDIEVERLH AFKLGLINQQ 540
  541 TDLFADQDAL STQITVYANL GRDDIAQRRG AKSDPNQAIQ SGYTNLDGYE IYGADLESQY 600
  601 RYQDFFSDLA VSWLQGEHRG SLKDSLGEDE YLANIAPLDI QLRVGMYITD SISVAWQGTW 660
  661 YDAQDNVPEG DIFNAESPSE NYFLQNIYLA YEPLDSLKGL SIRLMAKNLT NQQVTPFLSD 720
  721 GIPAPGRDVR LSLAYEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..737] PSI-BLAST 76.154902 Ferric hydroxamate uptake receptor FhuA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  2.60507547654721 bayes_pls_golite062009
  • heme transporter activity
    		•  2.15516892820591 bayes_pls_golite062009
  • cofactor transporter activity
    		•  1.63125627644933 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.86109425700917 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.424956094980482 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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