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Protein Overview: gi|24373111, gi|...

General Information:
Name(s) found: gi|24373111 [NCBI NR]
gi|24347300 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24373111|ref|NP_717154.1| isocitrate dehydrogenase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347300|gb|AAN54598.1|AE015599_10 isocitrate dehydrogenase, NAD-dependent [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 335 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: isocitrate dehydrogenase (NAD+) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRTITVIP GDGIGPSIID SALKILDKAG CDFEYEFADA GLAALEKQGE LLPQRTLELI  60
   61 EKNRITLKGP LTTPVGEGFT SINVTLRKKF GLYANVRPVL SFKGTQARYE NIDIITVREN 120
  121 TEGMYSGHGQ KVSEDGSTAE ATSIVTRQGA EQIATFAYEL ARKESRKKVT IVHKANIMKS 180
  181 TSGLFLKVAR EVSLRYPDIK TEEMIVDATC MKLVMNPENF DVIVTTNLFG DILSDLCAGL 240
  241 VGGLGMAPGA NIGRDAAIFE AVHGSAPDIA GKNLANPTSV ILASIQMLEY LGMADKAAPI 300
  301 RKAVSAVIEE GDRTTRDLGG THGTTDFTQA VLDRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..335] PSI-BLAST 108.0 Crystal structure of tetrameric homoisocitrate dehydrogenase from an extreme thermophile, Thermus thermophilus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle