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Protein Overview: gi|24373100, gi|...

General Information:
Name(s) found: gi|24373100 [NCBI NR]
gi|24347286 [NCBI NR]
Description(s) found:
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  • gi|24373100|ref|NP_717143.1| geranyltranstransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347286|gb|AAN54587.1|AE015598_6 geranyltranstransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • geranyltranstransferase [Shewanella oneidensis MR-1]gi|24347286|gb|AAN54587.1| geranyltranstransferase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • geranyltranstransferase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: farnesyl diphosphate biosynthetic process [ISSLink to PubMed article]
    Molecular Function: geranyltranstransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVNAIKEYQ LRVDDQLKQR FSTLEDTAPQ LKAAMTHGAL LGGKRIRPFL VYSVGQMFGV  60
   61 PLEKLDACAA AIECIHAYSL IHDDLPAMDD DALRRGQPTV HIAFDEATAI LAGDALQTLA 120
  121 FEIVTEAVPG ITSEQHIAMV RALAKASGYR GMCGGQAIDL ASTDKHIDLK ALTQLHNMKT 180
  181 GALISCAVEL ALIAANAPKD QYQTMMEFAH AVGLAFQVQD DILDIIATTE ELGKPQGSDA 240
  241 ESNKSTFPQL LGLQGAKDTA TQLIQEALSA LAKLPYNSQL IADFARYIIE RRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..293] PSI-BLAST 65.154902 Crystal Structure of the Shigella flexneri Farnesyl Pyrophosphate Synthase Complex with an Isopentenyl Pyrophosphate


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle