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Protein Overview: DXS_SHEON

General Information:
Name(s) found: DXS_SHEON [Swiss-Prot]
Description(s) found:
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  • gi|24373099|ref|NP_717142.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347285|gb|AAN54586.1|AE015598_5 deoxyxylulose-5-phosphate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • 1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella oneidensis (strain MR-1) GN=dxs PE=3 SV=1 [Swiss-Prot]
  • deoxyxylulose-5-phosphate synthase [Shewanella oneidensis MR-1]gi|24347285|gb|AAN54586.1| deoxyxylulose-5-phosphate synthase [Shewanella oneidensis MR-1]gi|30315824|sp|Q8EGR9|DXS_SHEON 1-deoxy-D-xylulose-5-phosphate synthase (1-deoxyxylulose-5-phosphate [nrdb_11152004_Chlamydomonas]
  • deoxyxylulose-5-phosphate synthase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 622 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridoxine biosynthetic process [ISSLink to PubMed article]
    isoprenoid biosynthetic process [ISSLink to PubMed article]
    thiamin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 1-deoxy-D-xylulose-5-phosphate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLDISQFPV LAQANTPNEL RQLPQALLPQ LADELREFLL KSVGMSSGHF ASGLGTVELT  60
   61 VALHYVYNTP FDRLIWDVGH QAYPHKILTG RRDRMHTIRQ KNGLHPFPWR EESEYDTFSV 120
  121 GHSGTSISAA LAMAVAAEKE QAGRKVVAVI GDGAMTGGMV FEAMNHAGDL HNDMLMVLND 180
  181 NEMSISENVG ALNNHLAQLM SGRFYTTIRE SSKKVLKGMP VIKEMAKRTE EHLKGMVVPG 240
  241 TLFEELGFNY IGPIDGHDVD ALVETLRNMR NLKGPQVLHI MTKKGRGYEP AEKDPIGWHA 300
  301 VPKFDPSLFK KPATKPGLPT FSQVFGKWLC DIAEQDEKVL GITPAMREGS GMVEFSQRFP 360
  361 KQYFDAAIAE QHAVTLGAGF ACEGYKPVVA IYSTFLQRGY DQLIHDVALQ RLPVLFAIDR 420
  421 GGIVGADGPT HQGAFDLSFM RCIPNMVIMA PSDENECRQM LYTGYCYDAG PSAVRYPRGS 480
  481 ATGATQVEAM TALPIGKGVI KRLGKRIALL NFGTTLAAAL TAAESLDATV VDMRFVKPLD 540
  541 VDLVKEMAQT HDVLVTVEEN AIMGGAGSGV LELLQQLKMP KPVLQIGLPD EFIKHGSPDE 600
  601 VIHDLQLDAE GMLAQINAYL AN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..622] PSI-BLAST 148.0 No description for 2o1sA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle