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Protein Overview: gi|24347248, gi|...

General Information:
Name(s) found: gi|24373069 [NCBI NR]
gi|24347248 [NCBI NR]
Description(s) found:
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  • gi|24373069|ref|NP_717112.1| glycogen operon protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347248|gb|AAN54556.1|AE015595_3 glycogen operon protein [Shewanella oneidensis MR-1] [NCBI NR]
  • glycogen operon protein [Shewanella oneidensis MR-1]gi|24347248|gb|AAN54556.1| glycogen operon protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • glycogen operon protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 750 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycogen metabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSAALINSG GSLPYSVSAG KAFPLGATVD DGGVNFALFS AHATGVELCL FDAQGKVEIQ  60
   61 RIALTEQTQQ IWHLYVHGLC AGQLYGYRVY GPYEPQLGHR FNPHKLLLDP YARQLVGRYH 120
  121 HHIANFGYEL DNPNEDLSFS TLDNAAYMPK CKVVDIRPLL AAAESQAIRP LSPHRNPLPI 180
  181 EQCIIYEMHL KGFTALHPEI DVPLRGTFAG LASKAAIDYL VKLGVNCVEL LPIQAFFSEP 240
  241 FLLEKQLSNY WGYNSIGFFA PEPSYLSSED IIEFRTMVDA LHGAGIEVIL DVVYNHSAEG 300
  301 SRLGPTFSFR GIDNLSYYRL HPNDKRFYIN DTGCGNTLNL NHPRMLQLVL DSLRYWVKVM 360
  361 GVDGFRFDLA ASLGREAYGF DPGSGFFDAL LQDPVLCRVK LIAEPWDIGP GGYQLGNFPV 420
  421 AFSEWNDRYR DTMRRFWRGD HGMLPEFARR FHGSGDFFEH SGRPPAASIN FLTSHDGFTL 480
  481 KDLVSYCERH NWANGEENRD GHHANFSYHY GVEGASNDVS VLVLRARQQR NLLTTLFLSQ 540
  541 GVPMLLSGDE TGRTQGGNNN AYCQDNPMNW FDWSSEGMDK HLLSFTQQLI ALRKRFPLLC 600
  601 AKRFIHEQLV ARSLESPSES PLGAAKFLTQ PSARLDWFSR QGKPMTKSLW SESMCRSLCV 660
  661 VLSGDLTAGI DVAGDNSFQA LLLMVNADEH PLAFTPPVFE HLGPWQCLLH TQTEPQYLTP 720
  721 TEPLDAQSSP TRYLLQDRSL MLFHADFIRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..750] PSI-BLAST 97.09691 STRUCTURE OF PSEUDOMONAS ISOAMYLASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  3.1190602686215 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  2.98773241907716 bayes_pls_golite062009
  • hydrolase activity
    		•  2.87134532188836 bayes_pls_golite062009
  • catalytic activity
    		•  2.22613067995402 bayes_pls_golite062009
  • glycogen debranching enzyme activity
    		•  1.61342226744611 bayes_pls_golite062009
  • 1,4-alpha-glucan branching enzyme activity
    		•  0.72343541139639 bayes_pls_golite062009
  • chitinase activity
    		•  0.67854733864231 bayes_pls_golite062009
  • glucosidase activity
    		•  0.58717079348538 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.16438321606077 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.15340916113777 bayes_pls_golite062009
  • amylase activity
    		•  0.0914002140078796 bayes_pls_golite062009
  • alpha-amylase activity
    		•  0.0521244165288097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle