YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24373057, gi|...

General Information:
Name(s) found: gi|24373057 [NCBI NR]
gi|24347233 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|24373057|ref|NP_717100.1| malate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347233|gb|AAN54544.1|AE015593_3 malate synthase A [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: malate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEHTLSEQQ VNLTLNKATA NGTLALVGNT IPGQEVIFTE GAMALLESLC REFGAEVPTL  60
   61 LAKRKDRQAR IDKGALPDFL PETRAIRDGA WKIRGIPNDL LDRRVEITGP VERKMVINAL 120
  121 NANAKVFMAD FEDSLAPSWQ KVVEGQINLR DAVRGEIEYT APETGKHYKL GPNPAVLICR 180
  181 VRGLHLKEKH VEFNQQSIPG GLFDFAMYFY HNYRQLLAKG SGPYFYIPKL ESHIEARWWA 240
  241 KVFAFVEERF CLQAGTIKCT CLIETLPAVF EMDEILYELR SNIVALNCGR WDYIFSYIKT 300
  301 LKRHGDRVLP DRQAVTMDTP FLSAYSRLLI KTCHKRGALA MGGMAAFIPA KDPAQNEAVL 360
  361 QRVRKDKELE ARNGHDGTWV AHPGLADTAM GIFNEYIGQD HQNQLHITRD VDAPILAAEL 420
  421 LKTCDGERTE QGMRLNIRIA LQYLEAWISG NGCVPIYGLM EDAATAEISR ASIWQWIQHG 480
  481 KSLSNGKLVT KQLFKDMLVE ELANVKKEVG SDRFTHGKFT QAAVLLEDIT TSDELVDFLT 540
  541 LPGYEMLTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..549] PSI-BLAST 98.0 No description for 2gq3A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  4.27762948199878 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  2.61158006337608 bayes_pls_golite062009
  • catalytic activity
    		•  1.23634637968745 bayes_pls_golite062009
  • transferase activity
    		•  0.263512092168681 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle