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Protein Overview: gi|24347039, gi|...

General Information:
Name(s) found: gi|24372910 [NCBI NR]
gi|24347039 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372910|ref|NP_716952.1| phosphoenolpyruvate-protein phosphotransferase PtsP [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347039|gb|AAN54397.1|AE015577_7 phosphoenolpyruvate-protein phosphotransferase PtsP [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 744 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system [ISSLink to PubMed article]
    Molecular Function: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNTLRDITQ AVASAHSLET ALEVLVSSTK AAMETQCCSV YILEQQELVL SATDGLEKSA  60
   61 VGRVRMPLTQ GLVGLAAERE EAVNLADARL HPRFKLFPEV AEEEYRAFLA VPIIYQKAVV 120
  121 GVIVVQQASA RQFSEGEEAF LMTLAAQLAM AIRGLKQKAQ VSSLHQQILF QGTSASSGIA 180
  181 IAHAFVLGGE ISLEQPDIRC EDIVLESNRL VAAMGRCKEA IGALSQRFDR EQDEEVASIF 240
  241 NALQLLLDDA SLGGEYAREV LLGWEAESAV SRVSLRYIQQ FLAMEDPYLK ERASDIRDLG 300
  301 QKVLRQLIEP ERLELEPDKP VILVTKEADA TMLAEFPRQK LAGIVTELGG VNSHAAILAR 360
  361 ALGVPAITGV EQLLSADIDQ KLLVVNASRG QLMVSPSPAI VSEYRSLISA QKALQRQYAQ 420
  421 ELTLPSVMLD GKRIRLYLNA GLLSGVASEI AEGADGIGLY RTEIPFMLQQ RFPSESEQVK 480
  481 VYQQVLSAAS GRPVVMRTLD VGGDKPLPYF PIKEDNPFLG WRGIRLSLDH PELFLVQLRA 540
  541 MLQAGAEGKQ LSILLPMVSN LDEIDQALAY LEQAHVELKN DVNSNIKMPR IGIMLEVPAM 600
  601 LYQLDEVAKR VDFVSVGSND LTQYLLAVDR NNPRVSSLFD SYHPGILRAL HQARLDCEYH 660
  661 HLDISICGEL AGEPMGAILL VAMGYHQLSM NQGSLARINY LLRRVSGEDL AQLLAQALSL 720
  721 SNGFQVRELV KEYLTLQGLV TILN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] PSI-BLAST 19.0 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains
    2 View Details [194..744] PSI-BLAST 149.0 No description for 2hroA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.29241390329225 bayes_pls_golite062009
  • binding
    		•  2.02315964268807 bayes_pls_golite062009
  • DNA binding
    		•  1.99643127799452 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.93476839291455 bayes_pls_golite062009
  • transcription factor activity
    		•  1.83436761962516 bayes_pls_golite062009
  • protein binding
    		•  0.321233885659081 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle