YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: TPIS_SHEON

General Information:
Name(s) found: TPIS_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • Triosephosphate isomerase OS=Shewanella oneidensis (strain MR-1) GN=tpiA PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycolysis [ISSLink to PubMed article]
    Molecular Function: triose-phosphate isomerase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRRPMVAG NWKMNGSAAL AQELFKKFAS KLQNDSAEVV LCPPSIYLES VRQLLEANKE  60
   61 ALDGSLVRMG AQNLSQHDFG AYTGEVSGQM LKDCGCRYVI IGHSERRRMY GETSNIVAEK 120
  121 FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDIVIQ KNGTMAFDNA IIAYEPLWAV 180
  181 GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI 240
  241 GGASLNSTEF LSLCTIAMSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..260] PSI-BLAST 94.522879 CRYSTAL STRUCTURE OF RABBIT MUSCLE TRIOSEPHOSPHATE ISOMERASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • triose-phosphate isomerase activity
    		•  5.94525596131351 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  4.11751506069887 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  3.62219160185043 bayes_pls_golite062009
  • isomerase activity
    		•  2.06271139232842 bayes_pls_golite062009
  • binding
    		•  1.80264931081179 bayes_pls_golite062009
  • catalytic activity
    		•  1.7524198174984 bayes_pls_golite062009
  • protein binding
    		•  0.33788557654084 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle