YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LNT_SHEON

General Information:
Name(s) found: LNT_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • Apolipoprotein N-acyltransferase OS=Shewanella oneidensis (strain MR-1) GN=lnt PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 518 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [ISSLink to PubMed article]
    Molecular Function: N-acyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTNIRAFAQ QKSRLSALRL VLAFILGAST ALSFAPYSLW IIYPIAMSLA LWQSESLNPK  60
   61 ASFFHWLSFG FGCFAVGISW VHVSMDTFGG LPLPASVALM ALLALYLALY PALTGLGLAW 120
  121 FTRTNSHSLW RNLLLFPALW TLTEWARGWV LTGFPWIWAG YSQTEGPLKA LASIIGALGL 180
  181 SFIIAMIAGA LALCFSKRYK SLLILLPITA VAAWVAPKLS QIQPTGESVK VALVQGNIPQ 240
  241 SMKWEPEALW PTLLKYMDLS REHFDADIIV WPEAAIPAPE SMVQDFLDNA NKVANLNHTS 300
  301 IITGIISRQQ EDFYNSLIVL GNHNQKQQDN PDYESDGSNQ FKKHHLLPIG EFVPFQALLR 360
  361 PIAPFFNLPM SSFARGDYLQ PNLSALGHKV APAICYEIAF PEQLRDSVNL GTDLLLTVSN 420
  421 DAWFGTSNGP LQHMEIAQMR AIELGRPLVR ATNNGVTAVV DENGNITAAL PQFETGVLSA 480
  481 TIPLVTGQTW FAKIGQTPLL ILCGALLLVG FIRRQKQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] MSA 1.26099 View MSA. No confident structure predictions are available.
    2 View Details [128..225] deduced N/A No confident structure predictions are available.
    3 View Details [226..518] PSI-BLAST 43.0 Crystal Structure of Hypothetical Protein PH0642 from Pyrococcus horikoshii

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity
    		•  1.52289641570734 bayes_pls_golite062009
  • binding
    		•  0.550662194183032 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.472813950465394 bayes_pls_golite062009
  • protein binding
    		•  0.360416829919237 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle