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Protein Overview: LIPA_SHEON

General Information:
Name(s) found: LIPA_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Lipoyl synthase OS=Shewanella oneidensis (strain MR-1) GN=lipA PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipoate biosynthetic process [ISSLink to PubMed article]
    Molecular Function: lipoic acid synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRPERLQPG VKLRDAEKVS RIPVKIVPSE RETMLRKPDW LRVKLPASNQ RILDIKQALR  60
   61 ANGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDEQEPVKLA 120
  121 QTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRKLN PEIKIEILVP DFRGRIDAAL 180
  181 DILSTEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKR FKERHPNVPT KSGLMMGLGE 240
  241 TNDEIAQVLR DLREHKVEML TLGQYLQPSK FHLPVERYVS PAEFDELKAL ADELGFTHAA 300
  301 CGPLVRSSYH ADLQAQGKEV K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..321] PSI-BLAST 43.0 The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • biotin synthase activity
    		•  2.22585029668171 bayes_pls_golite062009
  • radical SAM enzyme activity
    		•  2.08127882819276 bayes_pls_golite062009
  • catalytic activity
    		•  1.85375915825216 bayes_pls_golite062009
  • coproporphyrinogen oxidase activity
    		•  1.27516985221578 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  1.26112752511053 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  0.604275066192139 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  0.35292941647096 bayes_pls_golite062009
  • binding
    		•  0.0880406080456968 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle