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Protein Overview: gi|24372617, gi|...

General Information:
Name(s) found: gi|24372617 [NCBI NR]
gi|24346649 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372617|ref|NP_716659.1| alpha-ribazole-5'-phosphate phosphatase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346649|gb|AAN54104.1|AE015548_1 alpha-ribazole-5'-phosphate phosphatase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cobalamin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: alpha-ribazole-5'-P phosphatase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQVRLLLLR HGECEGGAIL RGRVDVPLSA KGWRQMSAAV ALQVCECHGI YSSTSRRCAE  60
   61 FAKVLATKHA SASVSSSFAS ASSNCISSNN FAAPTSSPLE VSLLEDLQEM DFGDWDGRLL 120
  121 DELYQQDGER MAAYWQDPWA VAPPKGETMA DFEARVDRAI AAILEQAFAC LPLGDKPADA 180
  181 AADTAANIWV VTHGGVIRHL MARALGAVKA VGFYSQLTLP VAALVTINVL EDNQGTRYWR 240
  241 LDWPSGHGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 54.09691 Structure of Phosphoglycerate Mutase from Plasmodium falciparum at 2.6 Resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.74758487942433 bayes_pls_golite062009
  • alpha-ribazole-5'-P phosphatase activity
    		•  0.174640929208739 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle