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Protein Overview: gi|24346284, gi|...

General Information:
Name(s) found: gi|24372336 [NCBI NR]
gi|24346284 [NCBI NR]
Description(s) found:
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  • gi|24372336|ref|NP_716378.1| ferredoxin--NADP reductase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346284|gb|AAN53823.1|AE015520_4 ferredoxin--NADP reductase [Shewanella oneidensis MR-1] [NCBI NR]
  • ferredoxin--NADP reductase [Shewanella oneidensis MR-1]gi|24346284|gb|AAN53823.1| ferredoxin--NADP reductase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • ferredoxin--NADP reductase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: ferredoxin-NADP+ reductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTRGRVIER IDWNDKLFSL RIAAELASFI PGQFIKLSQL QGDKRVARAY SLVNSPDKPY  60
   61 AEILAVAVED GQLSPQLQHL AIGDEIDITP TATGFMTLDE IPKGELQGRH LWFLATGTAV 120
  121 GPFLSMLDTA EPWQRFEKIV LVYGVREAKD LAYLDKLKGY AAQYPNQFIL CLAVTREKLD 180
  181 GALQCRIPDG LVSGEIERKV GLTLSAADSQ VMICGNPGMI SGAQAALLDK GLSKNLRRAP 240
  241 GQITVEKYW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 48.522879 FLAVODOXIN REDUCTASE FROM E. COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.45374095556065 bayes_pls_golite062009
  • binding
    		•  0.450899702470978 bayes_pls_golite062009
  • coenzyme binding
    		•  0.270924422726986 bayes_pls_golite062009
  • cofactor binding
    		•  0.2333379637469 bayes_pls_golite062009
  • transferase activity
    		•  0.00498326987177106 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle