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Protein Overview: gi|24345796, gi|...

General Information:
Name(s) found: gi|24371953 [NCBI NR]
gi|24345796 [NCBI NR]
Description(s) found:
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  • gi|24371953|ref|NP_715995.1| AMP-binding protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345796|gb|AAN53440.1|AE015483_6 AMP-binding protein [Shewanella oneidensis MR-1] [NCBI NR]
  • AMP-binding protein [Shewanella oneidensis MR-1]gi|24345796|gb|AAN53440.1| AMP-binding protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • AMP-binding protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 554 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: AMP binding [ISSLink to PubMed article]
    catalytic activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKAIKTPIE MLAHWANTRG DEIYLRQPIK GQYLDFTWNE VQEKVQQLAG ALRHLGLEPG  60
   61 DKIAVLSKNC AEWFITDLAL MHGGYISVPI YPTANPDTIR YVLQHSGAKA IFLGKLDHWA 120
  121 DQEAGVGGEL LRLAMPYDTM PAQYQWEQLL NMGNPLIEAP LPEPDQIMTL IYTSGSTGQP 180
  181 KGAIQTFASY GWTCQAVVRD LRTNGNDRLL SYLPLAHITE RVAIEGSSFY SGSVVAFVES 240
  241 LDSFVADVQR AKPTVFFSVP RLWSLFQKNI IDKIGVSKLN LLLKIPLISS LVKHKIHKGL 300
  301 GLNHCRLLGS GSAPIPPSLI HWYHSIGLNI CEAWGMTENC AYSIINYPFD VRKIGTVGKP 360
  361 VQDCQIRQGE DGELLIKSPG LMTAYYLQPE ATAAAFDADG FFHTGDLCAI DADGCVTITG 420
  421 RVKDNFKTAK GKYVAPVPIE RKLAQDPHVE LICVIGSGLP HPVALVQLSE GANLQAREEV 480
  481 RASLKATLDS VNPHLESHEH VDAIVVVNEP WSIENDVLTP TLKIKRHVLE KAFSERVDGI 540
  541 RGAQVRWEDE LAKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..554] PSI-BLAST 112.0 No description for 2p2bA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle