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Protein Overview: PNCC_SHEON

General Information:
Name(s) found: PNCC_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Nicotinamide-nucleotide amidohydrolase PncC OS=Shewanella oneidensis (strain MR-1) GN=pncC PE=1 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA metabolic process [ISSLink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLEMICTGE EVLSGQIVDT NAAWFASTMM EHGIEIQRRV TVGDRLEDLI AVFQERSLHA  60
   61 DVILVNGGLG PTSDDMSAEA MAKAKGESLV ENSEWRQRLE DWFTRNNREM PVSNLKQAML 120
  121 PVSAVMVDNP VGTACGFRVK LNRAWLFFTP GVPFELKHMV KEQFIPFIRD EFNLDAKVAL 180
  181 KKLLTIGHGE SALADKIEPL ELPEGITIGY RSSMPHIEIK IFARGEKAIA LLPRVAGHIK 240
  241 MVLGTAVVAE DKATLAEEIH FRLLNSGLTL SAAESCTGGM ITSQLVDFPG SSSYLQHGLV 300
  301 TYSNESKVRV LGVNPATLDD HGAVSIPTVE EMAKGARAIL DSDFALATSG IAGPDGGTED 360
  361 KPVGTVAIAL ATRSGVYSQM IKLPRRSRDL VRSLSAAVAY DMLRRELLSE AVIVDYQSIG 420
  421 RFSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 36.69897 No description for 2nqnA was found.
    2 View Details [249..424] PSI-BLAST 43.09691 The crystal structure of competence/damage inducible protein CihA from Agrobacterium tumefaciens

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.55991563183069 bayes_pls_golite062009
    2
    Term Confidence Notes
  • DNA binding
    		•  1.58937601934226 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.56192708201192 bayes_pls_golite062009
  • binding
    		•  1.50931468629846 bayes_pls_golite062009
  • catalytic activity
    		•  0.295853503406924 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle