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Protein Overview: gi|24371629, gi|...

General Information:
Name(s) found: gi|24371629 [NCBI NR]
gi|24345385 [NCBI NR]
Description(s) found:
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  • gi|24371629|ref|NP_715671.1| potassium transporter peripheral membrane component [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345385|gb|AAN53116.1|AE015454_10 potassium uptake protein TrkA [Shewanella oneidensis MR-1] [NCBI NR]
  • potassium uptake protein TrkA [Shewanella oneidensis MR-1]gi|24345385|gb|AAN53116.1| potassium uptake protein TrkA [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • potassium uptake protein TrkA [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 469 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: potassium ion transport [ISSLink to PubMed article]
    Molecular Function: potassium ion transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIILGAGQ VGGTLAENLV GENNDITIVD SDKSRLRALQ DKYDLRVVAG HGAHPNVLKE  60
   61 AGAEDADMLI AVTNSDECNM VACQMAYSLF GTPTKIARIR SEPYLAMRDK LFINSETKNS 120
  121 DGRPRGGFVI DELIAPEQLV TAYIERLVEY PGALQVLEFA EGRLSLVAVR AYYGGPLVGN 180
  181 ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHIR AVMSEMQKLD 240
  241 NSYRNIMIAG GGNIGLGLAK RLERTHSVKL IEHKFERAEA LSEQLENTTV FCGDASDQEL 300
  301 LLEEHIDQTD VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS 360
  361 PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS STSKVVGKAI GDIKLPPGTT 420
  421 IGAIVRNEEV LMAHDKTVIE QGDHVVLFLV NKKFIGEVEK LFQPSAFFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] PSI-BLAST 20.0 Ktn Mja218
    2 View Details [116..242] FFAS03 2.67 Potassium channel-related protein MthK
    3 View Details [243..469] PSI-BLAST 22.522879 Potassium channel-related protein MthK

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.40143066098294 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.794265596378362 bayes_pls_golite062009
  • potassium ion transmembrane transporter activity
    		•  0.7917593970345 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.667941911014379 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.644377496622781 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.455628854268609 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.439757800700606 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.189869347204878 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.40143066098294 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.794265596378362 bayes_pls_golite062009
  • potassium ion transmembrane transporter activity
    		•  0.7917593970345 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.667941911014379 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.644377496622781 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.455628854268609 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.439757800700606 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.189869347204878 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle