Protein Overview: SYGA_SHEON

General Information:
Name(s) found:	SYGA_SHEON [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|24371615\|ref\|NP_715657.1\| glycyl-tRNA synthetase subunit alpha [Shewanella oneidensis MR-1] [NCBI NR] gi\|24345368\|gb\|AAN53102.1\|AE015453_4 glycyl-tRNA synthetase, alpha subunit [Shewanella oneidensis MR-1] [NCBI NR] Glycine--tRNA ligase alpha subunit OS=Shewanella oneidensis (strain MR-1) GN=glyQ PE=3 SV=1 [Swiss-Prot] glycyl-tRNA synthetase, alpha subunit [Shewanella oneidensis MR-1]gi\|24345368\|gb\|AAN53102.1\| glycyl-tRNA synthetase, alpha subunit [Shewanella oneidensis MR-1]gi\|30316225\|sp\|Q8EKS5\|SYGA_SHEON Glycyl-tRNA synthetase alpha chain (Glycine--tRNA ligase alph [nrdb_11152004_Chlamydomonas] glycyl-tRNA synthetase alpha subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta] glycyl-tRNA synthetase, alpha subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
Organism:	Shewanella oneidensis MR-1
Length:	301 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	glycyl-tRNA aminoacylation [ISS]
Molecular Function:	glycine-tRNA ligase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKHDVKTF QGFILTLQEY WAQQGCAIVQ PLDMEVGAGT FHPQTFLRSL GPEPMSSAYV  60
   61 QPSRRPTDGR YGENPNRLQH YYQFQVVLKP SPDNIQELYL GSLQALGIDT QIHDIRFVED 120
  121 NWESPTLGAW GLGWEVWLNG MEVTQFTYFQ QVGGLECSPV TGEITYGLER LAMYIQGVDS 180
  181 VYDLVWTDGP MGRITYGDVF HQNEVEQSTY NFEHADVDFM FALFDQCEKM CQHLLSLEKP 240
  241 LPLPAYEQVM KASHAFNLLD ARHAISVTER QRYILRVRTM AKAVAESYYQ AREALGFPMC 300
  301 K

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
glycine-tRNA ligase activity	13.4352200543886	bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds	7.89468709683036	bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds	7.89468709683036	bayes_pls_golite062009
aminoacyl-tRNA ligase activity	7.88410036819636	bayes_pls_golite062009
ligase activity	6.92073480193262	bayes_pls_golite062009
phenylalanine-tRNA ligase activity	3.4145644216516	bayes_pls_golite062009
threonine-tRNA ligase activity	2.18642354927	bayes_pls_golite062009
serine-tRNA ligase activity	2.07594942154162	bayes_pls_golite062009
catalytic activity	1.99372273395202	bayes_pls_golite062009
alanine-tRNA ligase activity	1.82594054955281	bayes_pls_golite062009
lysine-tRNA ligase activity	1.72324031407565	bayes_pls_golite062009
histidine-tRNA ligase activity	1.72215103383322	bayes_pls_golite062009
asparagine-tRNA ligase activity	0.921492123574877	bayes_pls_golite062009
binding	0.311307565529325	bayes_pls_golite062009
aspartate-tRNA ligase activity	0.00572514744734753	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..301]	PSI-BLAST	149.0	Glycyl-tRNA synthetase (GlyRS) alpha chain

Protein Overview: SYGA_SHEON

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: