YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SYGB_SHEON

General Information:
Name(s) found: SYGB_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • Glycine--tRNA ligase beta subunit OS=Shewanella oneidensis (strain MR-1) GN=glyS PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 688 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycyl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: glycine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFENLLIEL GTEELPPKAL RKLAESFLAN FTEELTKADL AFKSAVWYAA PRRLALNITE  60
   61 LAIAQADKIV EKRGPAVSSA FDAGGKPTKA AEGWARGNGI TVDQAERLVT DKGEWLVYNA 120
  121 KVEGVETKSL VAAMAQRALD KLPIPKPMRW GSSKTQFIRP VHTATMLLGS ELIEGELLGI 180
  181 KSARNIRGHR FMGTGFELDH ADNYLTLLKE KGKVIADYES RKALIKADAE KAAAKIGGTA 240
  241 DIEDALLEEV TSLVEWPVVL TASFEEKFLS VPSEALVYTM KGDQKYFPVF DDAGKLLPNF 300
  301 IFVANIESKD PAQIISGNEK VVRPRLADAE FFFNTDKKHT LESRLPSLET VLFQQQLGTL 360
  361 KDKVTRISAL AAFIAEQTGA NAVDAARAGL LSKTDLMTNM VMEFTDTQGT MGMHYARLDG 420
  421 ETEAVALAME EQYKPKFSGD TVPTAAVSCA VALADKLDTL VGIFGIGQAP KGAADPFALR 480
  481 RAAIGVLRII VENKLPLDLV TLIAKAQELH GANLSNANAS EEVLEFLMAR FRAWYQDKGI 540
  541 NVDVILAVLA RRPTRPADFD SRINAVSHFR GLEASSALAA ANKRVSNILA KVEGELPSSV 600
  601 NVALLSEAAE QALAAKLAEL QPQLAPLFAN ADYQQALTLL ASLRESVDQF FEDVMVMADD 660
  661 AALRNNRLAL LNNLREQFLH VADISLLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] MSA 3.068989 View MSA. Confident ab initio structure predictions are available.
    2 View Details [76..271] deduced N/A No confident structure predictions are available.
    3 View Details [272..339] MSA 1.071983 View MSA. No confident structure predictions are available.
    4 View Details [340..443] deduced N/A Confident ab initio structure predictions are available.
    5 View Details [444..688] PSI-BLAST 40.221849 Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle