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Protein Overview: gi|24345361, gi|...

General Information:
Name(s) found: gi|24371611 [NCBI NR]
gi|24345361 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24371611|ref|NP_715653.1| DNA gyrase, B subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345361|gb|AAN53098.1|AE015452_11 DNA gyrase, B subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 805 amino acids

    Gene Ontology:
    Cellular Component: DNA topoisomerase complex (ATP-hydrolyzing) [ISSLink to PubMed article]
    Biological Process: DNA replication [ISSLink to PubMed article]
    Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNSID EALAGHCTDI  60
   61 TITIHVDGSV SVKDDGRGIP VSIHEEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG 120
  121 VSVVNALSKK LQLTIRRDGK VHEQFYTHGV PDAPIKEIGD ATKTGTEIRF WPSEQTFSNV 180
  181 EFHFEILAKR VRELSFLNSG VGIRLVDERD NKNEFFKYEG GISAFVDYLN RNKTPVNKDV 240
  241 FHFMQERDDG ITVEVAMQWN DGYQENIFCF TNNIPQRDGG THLAGFRSAL TRNLNNYMEN 300
  301 EGYNKKGKTN ATGDDAREGL TAVISVKVPD PKFSSQTKDK LVSSEVKAAV EQTMGEKLND 360
  361 YLLENPADAK LIVGKIVDAA RAREAARKAR EMTRRKGALD LGGLPGKLAD CQEKDPGLSE 420
  421 IYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG 480
  481 RDEYNPDKTR YHNIIIMTDA DVDGSHIRTL LLTFFFRQMP ELIERGYVYI AQPPLFKVKK 540
  541 GKQEQYLKDE SALTQYLTTQ ALDGTSIYPS QGAPGMSGEP LERLVTQYRE VEAIVARLEQ 600
  601 RYPTHITNRM LYHPMISNDM LADEAKMKEW IDAFIHELVE LENSGVLYSG EPVLDPERKV 660
  661 YLPKITIRKH GIDTHYLFSY DFFQSMDYQR IAKLGAALEG LIEVGGYVQR GDRVKEVGSF 720
  721 IEALDWTISE AKRGLYIQRY KGLGEMNPEQ LWETTMDPES RRMLQVTIDD AVGADQLFTC 780
  781 LMGDQVEPRR EFIEANALNV ANLDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..395] PSI-BLAST 160.0 DNA gyrase B
    2 View Details [396..731] PSI-BLAST 56.522879 TOPOISOMERASE RESIDUES 410-1202,
    3 View Details [732..805] FFAS03 1.94 TOPOISOMERASE RESIDUES 410-1202,


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle