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Protein Overview: YPP1_YEAST

General Information:
Name(s) found: YPP1_YEAST [Swiss-Prot]
Description(s) found:
  • Cargo-transport protein YPP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPP1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 817 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNSNVRIPP TVPSKIIDVV DQALRARLLG GSTFNSGFDS LDSVLNLQFR LHYHVIGSNG  60
   61 PAKPVCDVLL KESQNLEKNM SMMEELNDYP EITKLVEKIL FNCLGILFFH RGQFQESQRC 120
  121 LLHSLKIHNN TASQKTALME QYDRYLIVEN LYYRGLVSQD INIMQNVFYK ELLAHVDTIP 180
  181 PESNGLLFEY ISLIVAKLRF NQIQDLAENF KTTVENPFIL FLYMIKKFQS PLKKHIDNDD 240
  241 LYLKFGQNVL LKAKFPTASE TNDEALEHFN VFLQYYFKFT HIKKIKVNPS WYNFIISSME 300
  301 KTFQSIEVSK TAMFLFQNLS DNSNDEIKKK TFKRESILNF VNFVKYNDKY YQLHDNSHRD 360
  361 IISFIDAYSF ILQNSSKTDS IENVFDYDNT VSTFATSLNS FYKEYNLPLM SQSESLDWLE 420
  421 NSTRCVYPGN ISKVLTNAWS TLYEIRKYQL DFLVSNNLTS YLCNAMMLST KEKDNADVEE 480
  481 QEEGEEEKAL RELQFKYSYT LAQQRHIETA IKTLESLILS KNPNYYKAWH LLALCRSVQE 540
  541 DKEMSYKIVC SVLEAMNESL QNNTLLLNDR WQFIHLKLTQ LALIEEIFGT LEALETLPEV 600
  601 FELYATLFPD SQPELNSMGP KYSQTKEYLL QMVWIFAANM YMRTKDNDED AKAAIKEASN 660
  661 VESKFKNLNC NIANGYLSII KDEPGVALKE FETVLYYDEN NLDALVGFAE LIFPEELGVE 720
  721 ETNLERYYTL SLDKKPGKRA KLTFVNDTDR SAAYARLKFL LECAILESIE AYYSPEVWWY 780
  781 LSLIYEKYQD DEYKNSLLKC IKYQELNPIR SLRYCNY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 15.221849 Hop
    2 View Details [180..257] deduced N/A No confident structure predictions are available.
    3 View Details [258..403] PSI-BLAST 30.0 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
    4 View Details [404..471] PSI-BLAST 30.0 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
    5 View Details [472..608] PSI-BLAST 30.0 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
    6 View Details [609..817] MSA 1.657995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal sequence binding
    		•  2.68460419248567 bayes_pls_golite062009
  • binding
    		•  2.29041171814244 bayes_pls_golite062009
  • protein binding
    		•  1.6279032205159 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.36301889945421 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.04482640570705 bayes_pls_golite062009
  • DNA binding
    		•  1.03582297487751 bayes_pls_golite062009
  • peroxisome targeting sequence binding
    		•  1.01220052237687 bayes_pls_golite062009
  • ligase activity
    		•  0.825764637499128 bayes_pls_golite062009
  • RNA binding
    		•  0.540255067346835 bayes_pls_golite062009
  • transcription factor activity
    		•  0.39224150319016 bayes_pls_golite062009
  • signal transducer activity
    		•  0.279505673062022 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.279505673062022 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle