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Protein Overview: TFC5_YEAST

General Information:
Name(s) found: TFC5_YEAST [Swiss-Prot]
Description(s) found:
  • Transcription factor TFIIIB component B'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BDP1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 594 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSIVNKSGT RFAPKVRQRR AATGGTPTPK PRTPQLFIPE SKEIEEDNSD NDKGVDENET  60
   61 AIVEKPSLVG ERSLEGFTLT GTNGHDNEIG DEGPIDASTQ NPKADVIEDN VTLKPAPLQT 120
  121 HRDQKVPRSS RLASLSKDNE SRPSFKPSFL DSSSNSNGTA RRLSTISNKL PKKIRLGSIT 180
  181 ENDMNLKTFK RHRVLGKPSS AKKPAGAHRI SIVSKISPPT AMTDSLDRNE FSSETSTSRE 240
  241 ADENENYVIS KVKDIPKKVR DGESAKYFID EENFTMAELC KPNFPIGQIS ENFEKSKMAK 300
  301 KAKLEKRRHL RELRMRARQE FKPLHSLTKE EQEEEEEKRK EERDKLLNAD IPESDRKAHT 360
  361 AIQLKLNPDG TMAIDEETMV VDRHKNASIE NEYKEKVDEN PFANLYNYGS YGRGSYTDPW 420
  421 TVEEMIKFYK ALSMWGTDFN LISQLYPYRS RKQVKAKFVN EEKKRPILIE LALRSKLPPN 480
  481 FDEYCCEIKK NIGTVADFNE KLIELQNEHK HHMKEIEEAK NTAKEEDQTA QRLNDANLNK 540
  541 KGSGGIMTND LKVYRKTEVV LGTIDDLKRK KLKERNNDDN EDNEGSEEEP EIDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..384] MSA 8.167997 View MSA. No confident structure predictions are available.
    2 View Details [385..478] Pfam 10.39794 Myb-like DNA-binding domain No confident structure predictions are available.
    3 View Details [479..594] MSA 1.097993 View MSA. No confident structure predictions are available.
    4 View Details [420..512] FFAS03 1.12 No description for 2nogA was found.
    5 View Details [513..594] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle