| Protein: | BDP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 594 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BDP1.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-60 | [2..565] | [526..1086] |
|
|
8.0E-60 | [27..427] | [531..996] |
|
Region A: Residues: [1-384] |
1 11 21 31 41 51
| | | | | |
1 MSSIVNKSGT RFAPKVRQRR AATGGTPTPK PRTPQLFIPE SKEIEEDNSD NDKGVDENET 60
61 AIVEKPSLVG ERSLEGFTLT GTNGHDNEIG DEGPIDASTQ NPKADVIEDN VTLKPAPLQT 120
121 HRDQKVPRSS RLASLSKDNE SRPSFKPSFL DSSSNSNGTA RRLSTISNKL PKKIRLGSIT 180
181 ENDMNLKTFK RHRVLGKPSS AKKPAGAHRI SIVSKISPPT AMTDSLDRNE FSSETSTSRE 240
241 ADENENYVIS KVKDIPKKVR DGESAKYFID EENFTMAELC KPNFPIGQIS ENFEKSKMAK 300
301 KAKLEKRRHL RELRMRARQE FKPLHSLTKE EQEEEEEKRK EERDKLLNAD IPESDRKAHT 360
361 AIQLKLNPDG TMAIDEETMV VDRH
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [385-478] |
1 11 21 31 41 51
| | | | | |
1 KNASIENEYK EKVDENPFAN LYNYGSYGRG SYTDPWTVEE MIKFYKALSM WGTDFNLISQ 60
61 LYPYRSRKQV KAKFVNEEKK RPILIELALR SKLP
|
| Detection Method: | |
| Confidence: | 10.39794 |
| Match: | PF00249 |
| Description: | Myb-like DNA-binding domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [479-594] |
1 11 21 31 41 51
| | | | | |
1 PNFDEYCCEI KKNIGTVADF NEKLIELQNE HKHHMKEIEE AKNTAKEEDQ TAQRLNDANL 60
61 NKKGSGGIMT NDLKVYRKTE VVLGTIDDLK RKKLKERNND DNEDNEGSEE EPEIDQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [420-512] |
1 11 21 31 41 51
| | | | | |
1 WTVEEMIKFY KALSMWGTDF NLISQLYPYR SRKQVKAKFV NEEKKRPILI ELALRSKLPP 60
61 NFDEYCCEIK KNIGTVADFN EKLIELQNEH KHH
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 2nogA |
| Description: | No description for 2nogA was found. |
|
Region A: Residues: [513-594] |
1 11 21 31 41 51
| | | | | |
1 MKEIEEAKNT AKEEDQTAQR LNDANLNKKG SGGIMTNDLK VYRKTEVVLG TIDDLKRKKL 60
61 KERNNDDNED NEGSEEEPEI DQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
