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Protein Overview: TBCB_YEAST

General Information:
Name(s) found: TBCB_YEAST [Swiss-Prot]
Description(s) found:
  • Tubulin-specific chaperone B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALF1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 254 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRVVIESEL VRTEKELPNS LKLRQFKDRL YHVTGVEPED MEIVVKRQYD NKEIYSTKKG  60
   61 GAYSNEDEDA NFLKGEEELI VVVTDSNAQS ISNQLATQAE GIPSMEVISE EDYLRRDQSV 120
  121 LRWKMAHGYG RFNAAQQSQR AALAKQDEAY AREQLTAAIG RHCRVTVDGS APREAILRYV 180
  181 GPLPLDVMGT WCGVEFPEAA GKNDGRINGV TLFGPVAPGH GSFVRPRAVE ILSKDEESAE 240
  241 VEDVHDDVES DDEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] MSA 7.037983 View MSA. No confident structure predictions are available.
    2 View Details [143..254] PSI-BLAST 94.221849 Cytoskeleton-associated protein F53F4.3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.19381585790185 bayes_pls_golite062009
  • protein binding
    		•  1.17197911794381 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.599634454232833 bayes_pls_golite062009
  • structural molecule activity
    		•  0.576819726104993 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.383121378043805 bayes_pls_golite062009
  • DNA binding
    		•  0.0840213088061073 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0485636215870291 bayes_pls_golite062009
    2
    Term Confidence Notes
  • tubulin binding
    		•  2.81573953488242 bayes_pls_golite062009
  • microtubule binding
    		•  2.67824962486294 bayes_pls_golite062009
  • binding
    		•  2.07863891614262 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.95334135428526 bayes_pls_golite062009
  • microtubule plus-end binding
    		•  1.16043967945651 bayes_pls_golite062009
  • protein binding
    		•  0.896264971703612 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.625661567957308 bayes_pls_golite062009
  • DNA binding
    		•  0.336599045092266 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.292990934444865 bayes_pls_golite062009
  • catalytic activity
    		•  0.069855517589921 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle