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Protein Overview: SCD6_YEAST

General Information:
Name(s) found: SCD6_YEAST [Swiss-Prot]
Description(s) found:
  • Protein SCD6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCD6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 349 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQYIGKTIS LISVTDNRYV GLLEDIDSEK GTVTLKEVRC FGTEGRKNWG PEEIYPNPTV  60
   61 YNSVKFNGSE VKDLSILDAN INDIQPVVPQ MMPPASQFPP QQAQSPPQAQ AQAHVQTNPQ 120
  121 VPKPESNVPA AVAGYGVYTP TSTETATASM NDKSTPQDTN VNSQSRERGK NGENEPKYQR 180
  181 NKNRSSNRPP QSNRNFKVDI PNEDFDFQSN NAKFTKGDST DVEKEKELES AVHKQDESDE 240
  241 QFYNKKSSFF DTISTSTETN TNMRWQEEKM LNVDTFGQAS ARPRFHSRGL GRGRGNYRGN 300
  301 RGNRGRGGQR GNYQNRNNYQ NDSGAYQNQN DSYSRPANQF SQPPSNVEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] MSA 11.046997 View MSA. No confident structure predictions are available.
    2 View Details [190..349] MSA 1.038996 View MSA. No confident structure predictions are available.
    3 View Details [199..349] MSA 4.047991 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  2.51705668632443 bayes_pls_golite062009
  • binding
    		•  1.99976233340317 bayes_pls_golite062009
    		• 1.84806098577575 bayes_pls_golite062009
  • RNA binding
    		•  1.49949321414131 bayes_pls_golite062009
  • protein binding
    		•  0.418315253537627 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle