Protein: | SCD6 |
Organism: | Saccharomyces cerevisiae |
Length: | 349 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCD6.
Description | E-value | Query Range |
Subject Range |
|
4.0E-88 | [1..349] | [1..349] |
|
2.0E-77 | [2..281] | [73..417] |
|
1.0E-75 | [2..281] | [7..351] |
|
6.0E-75 | [2..335] | [5..322] |
|
6.0E-74 | [2..278] | [5..375] |
|
5.0E-71 | [2..277] | [5..398] |
Region A: Residues: [1-189] |
1 11 21 31 41 51 | | | | | | 1 MSQYIGKTIS LISVTDNRYV GLLEDIDSEK GTVTLKEVRC FGTEGRKNWG PEEIYPNPTV 60 61 YNSVKFNGSE VKDLSILDAN INDIQPVVPQ MMPPASQFPP QQAQSPPQAQ AQAHVQTNPQ 120 121 VPKPESNVPA AVAGYGVYTP TSTETATASM NDKSTPQDTN VNSQSRERGK NGENEPKYQR 180 181 NKNRSSNRP |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
nucleic acid binding | 2.51705668632443 | bayes_pls_golite062009 |
binding | 1.99976233340317 | bayes_pls_golite062009 |
1.84806098577575 | bayes_pls_golite062009 | |
RNA binding | 1.49949321414131 | bayes_pls_golite062009 |
protein binding | 0.418315253537627 | bayes_pls_golite062009 |
Region A: Residues: [190-349] |
1 11 21 31 41 51 | | | | | | 1 PQSNRNFKVD IPNEDFDFQS NNAKFTKGDS TDVEKEKELE SAVHKQDESD EQFYNKKSSF 60 61 FDTISTSTET NTNMRWQEEK MLNVDTFGQA SARPRFHSRG LGRGRGNYRG NRGNRGRGGQ 120 121 RGNYQNRNNY QNDSGAYQNQ NDSYSRPANQ FSQPPSNVEF |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [199-349] |
1 11 21 31 41 51 | | | | | | 1 DIPNEDFDFQ SNNAKFTKGD STDVEKEKEL ESAVHKQDES DEQFYNKKSS FFDTISTSTE 60 61 TNTNMRWQEE KMLNVDTFGQ ASARPRFHSR GLGRGRGNYR GNRGNRGRGG QRGNYQNRNN 120 121 YQNDSGAYQN QNDSYSRPAN QFSQPPSNVE F |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.