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Protein Overview: RL27A_YEAST

General Information:
Name(s) found: RL27A_YEAST [Swiss-Prot]
Description(s) found:
  • 60S ribosomal protein L27-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL27A PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 136 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKFLKAGKV AVVVRGRYAG KKVVIVKPHD EGSKSHPFGH ALVAGIERYP LKVTKKHGAK  60
   61 KVAKRTKIKP FIKVVNYNHL LPTRYTLDVE AFKSVVSTET FEQPSQREEA KKVVKKAFEE 120
  121 RHQAGKNQWF FSKLRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..49] Pfam 3.721246 KOW motif No confident structure predictions are available.
    2 View Details [50..136] Pfam 61.585027 Ribosomal L27e protein family No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.33175622373475 bayes_pls_golite062009
  • structural molecule activity
    		•  8.78104488316498 bayes_pls_golite062009
  • translation elongation factor activity
    		•  2.67300686401704 bayes_pls_golite062009
  • binding
    		•  1.53082494948413 bayes_pls_golite062009
  • RNA binding
    		•  1.34286989242843 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.34250569976274 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.24801565562229 bayes_pls_golite062009
  • DNA binding
    		•  0.817602006068725 bayes_pls_golite062009
  • protein binding
    		•  0.247509245072821 bayes_pls_golite062009
  • transcription factor activity
    		•  0.151888933180377 bayes_pls_golite062009
  • translation regulator activity
    		•  0.084754562593104 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.0564075582229911 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle