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Protein Overview: RIB1_YEAST

General Information:
Name(s) found: RIB1_YEAST [Swiss-Prot]
Description(s) found:
  • GTP cyclohydrolase-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIB1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIDNYDNSK QDSSKYEVSG TGDGRNGDGG LPLVQCVARA RIPTTQGPDI FLHLYSNNRD  60
   61 NKEHLAIVFG EDIRSRSLFR RRQCETQQDR MIRGAYIGKL YPGRTVADED DRLGLALEFD 120
  121 DSTGELLASK ATTWDAHNDT LVRIHSECYT GENAWSARCD CGEQFDRAGR LIACDHEPTS 180
  181 NIKGGNGHGV IVYLRQEGRG IGLGEKLKAY NLQDLGADTV QANLMLKHPV DARDFSLGKA 240
  241 ILLDLGIGNV RLLTNNPEKI KQVDHAPYLK CVERVPMVPI HWTNSSEGID SKEIEGYLRT 300
  301 KIERMGHLLT EPLKLHTNPQ PTETSEAQNQ NRMNSALSST STLAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] PSI-BLAST 5.69897 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
    2 View Details [135..186] deduced N/A No confident structure predictions are available.
    3 View Details [187..345] MSA 1.073971 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • GTP cyclohydrolase activity
    		•  4.36867535385235 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  3.7708397651039 bayes_pls_golite062009
  • cyclohydrolase activity
    		•  3.33696578638249 bayes_pls_golite062009
  • catalytic activity
    		•  1.40764037338379 bayes_pls_golite062009
  • binding
    		•  1.36587778604607 bayes_pls_golite062009
  • protein binding
    		•  0.182596805520355 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle