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Protein Overview: PABS_YEAST

General Information:
Name(s) found: PABS_YEAST [Swiss-Prot]
Description(s) found:
  • Aminodeoxychorismate synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ABZ1 PE=1 SV=4 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 787 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSDTIDTKQ QQQQLHVLFI DSYDSFTYNV VRLIEQQTDI SPGVNAVHVT TVHSDTFQSM  60
   61 DQLLPLLPLF DAIVVGPGPG NPNNGAQDMG IISELFENAN GKLDEVPILG ICLGFQAMCL 120
  121 AQGADVSELN TIKHGQVYEM HLNDAARACG LFSGYPDTFK STRYHSLHVN AEGIDTLLPL 180
  181 CTTEDENGIL LMSAQTKNKP WFGVQYHPES CCSELGGLLV SNFLKLSFIN NVKTGRWEKK 240
  241 KLNGEFSDIL SRLDRTIDRD PIYKVKEKYP KGEDTTYVKQ FEVSEDPKLT FEICNIIREE 300
  301 KFVMSSSVIS ENTGEWSIIA LPNSASQVFT HYGAMKKTTV HYWQDSEISY TLLKKCLDGQ 360
  361 DSDLPGSLEV IHEDKSQFWI TLGKFMENKI IDNHREIPFI GGLVGILGYE IGQYIACGRC 420
  421 NDDENSLVPD AKLVFINNSI VINHKQGKLY CISLDNTFPV ALEQSLRDSF VRKKNIKQSL 480
  481 SWPKYLPEEI DFIITMPDKL DYAKAFKKCQ DYMHKGDSYE MCLTTQTKVV PSAVIEPWRI 540
  541 FQTLVQRNPA PFSSFFEFKD IIPRQDETPP VLCFLSTSPE RFLKWDADTC ELRPIKGTVK 600
  601 KGPQMNLAKA TRILKTPKEF GENLMILDLI RNDLYELVPD VRVEEFMSVQ EYATVYQLVS 660
  661 VVKAHGLTSA SKKTRYSGID VLKHSLPPGS MTGAPKKITV QLLQDKIESK LNKHVNGGAR 720
  721 GVYSGVTGYW SVNSNGDWSV NIRCMYSYNG GTSWQLGAGG AITVLSTLDG ELEEMYNKLE 780
  781 SNLQIFM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 257.855515 Anthranilate synthase GAT subunit, TrpG
    2 View Details [250..787] PSI-BLAST 481.457575 P-aminobenzoate synthase component I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • anthranilate synthase activity
    		•  9.07528926783927 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  7.16633518631507 bayes_pls_golite062009
  • 4-amino-4-deoxychorismate synthase activity
    		•  4.48164623771604 bayes_pls_golite062009
  • indole-3-glycerol-phosphate synthase activity
    		•  4.14261580175621 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.7339517212315 bayes_pls_golite062009
  • ligase activity
    		•  1.70348758031146 bayes_pls_golite062009
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • binding
    		•  1.22860407524238 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  1.01721974200042 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.774587372455935 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.628648036096965 bayes_pls_golite062009
  • imidazoleglycerol-phosphate synthase activity
    		•  0.270391651600004 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.0769356405014503 bayes_pls_golite062009
  • protein binding
    		•  0.0152024556625711 bayes_pls_golite062009
    2
    Term Confidence Notes
  • anthranilate synthase activity
    		•  11.4918303265177 bayes_pls_golite062009
  • 4-amino-4-deoxychorismate synthase activity
    		•  9.91522831720207 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  9.57649905871948 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.42362294309332 bayes_pls_golite062009
  • catalytic activity
    		•  2.11110806828104 bayes_pls_golite062009
  • binding
    		•  1.73874372115438 bayes_pls_golite062009
  • lyase activity
    		•  0.454734323696838 bayes_pls_golite062009
  • protein binding
    		•  0.323833479841771 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle