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Protein Overview: NGR1_YEAST

General Information:
Name(s) found: NGR1_YEAST [Swiss-Prot]
Description(s) found:
  • Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NGR1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 672 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSNVANASQ RQENPYIIPL PPSSTVETST EPPRTLWMGD LDPSFDEATI EEIWSKLDKK  60
   61 VIVKLIRAKK NLLIPCSSTS SSNNNTSEEN AENQQSASNS TDQLDNSQMI NINGISFIDP 120
  121 STTQLHHAGY CFVEFETQKD AKFALSLNAT PLPNFYSPTT NSQTNPTFKR TFRLNWASGA 180
  181 TLQSSIPSTP EFSLFVGDLS PTATEADLLS LFQTRFKSVK TVRVMTDPLT GSSRCFGFVR 240
  241 FGDEDERRRA LIEMSGKWFQ GRALRVAYAT PRNNMMLQLQ EQQQQQQQLQ QQHQQLDQED 300
  301 NNGPLLIKTA NNLIQNNSNM LPLNALHNAP PMHLNEGGIS NMRVNDSLPS NTYNTDPTNT 360
  361 TVFVGGLVPK TTEFQLRSLF KPFGPILNVR IPNGKNCGFV KFEKRIDAEA SIQGLQGFIV 420
  421 GGSPIRLSWG RPSSSNAKTN STIMGASQYM SSNGLRAPSA ASSVDNSKQI LEQYAEDKRR 480
  481 LFLHQQQQQQ QQQQQDGNFS MEQMAHNNYY NYNNYDYHRN KNGSHSDLVN LQRSNVPYMQ 540
  541 EDGALYPHQY SSPSYSLHPT GNQFSNATNN LPQFGNAMSI SMQLPNGNSN KTASSMNTNP 600
  601 NTNMIMNSNM NMNMNVNPVP YGMGNGANMY DVSRMMTPPL NIAPNSNNSK SSIMNKHPNR 660
  661 NNVPPIHPSL LH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] PSI-BLAST 92.54902 Poly(A)-binding protein
    2 View Details [87..184] PSI-BLAST 89.28043 Hu antigen D (Hud)
    3 View Details [185..306] PSI-BLAST 89.28043 Hu antigen D (Hud)
    4 View Details [307..358] deduced N/A No confident structure predictions are available.
    5 View Details [359..475] PSI-BLAST 13.221849 CBP20, 20KDa nuclear cap-binding protein
    6 View Details [476..584] deduced N/A No confident structure predictions are available.
    7 View Details [585..672] PSI-BLAST 11.0 poly(A) binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA binding
    		•  3.27266833016156 bayes_pls_golite062009
  • binding
    		•  2.80563734517858 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.18035791990719 bayes_pls_golite062009
  • mRNA binding
    		•  2.17710836425586 bayes_pls_golite062009
  • protein binding
    		•  1.02232785292059 bayes_pls_golite062009
    		• 0.787367154319901 bayes_pls_golite062009
  • single-stranded RNA binding
    		•  0.419268956417989 bayes_pls_golite062009
  • structural molecule activity
    		•  0.106871867442361 bayes_pls_golite062009
    2
    Term Confidence Notes
  • RNA binding
    		•  3.27266833016156 bayes_pls_golite062009
  • binding
    		•  2.80563734517858 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.18035791990719 bayes_pls_golite062009
  • mRNA binding
    		•  2.17710836425586 bayes_pls_golite062009
  • protein binding
    		•  1.02232785292059 bayes_pls_golite062009
    		• 0.787367154319901 bayes_pls_golite062009
  • single-stranded RNA binding
    		•  0.419268956417989 bayes_pls_golite062009
  • structural molecule activity
    		•  0.106871867442361 bayes_pls_golite062009
    3
    Term Confidence Notes
  • RNA binding
    		•  3.27266833016156 bayes_pls_golite062009
  • binding
    		•  2.80563734517858 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.18035791990719 bayes_pls_golite062009
  • mRNA binding
    		•  2.17710836425586 bayes_pls_golite062009
  • protein binding
    		•  1.02232785292059 bayes_pls_golite062009
    		• 0.787367154319901 bayes_pls_golite062009
  • single-stranded RNA binding
    		•  0.419268956417989 bayes_pls_golite062009
  • structural molecule activity
    		•  0.106871867442361 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle