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Protein Overview: NEW1_YEAST

General Information:
Name(s) found: NEW1_YEAST [Swiss-Prot]
Description(s) found:
  • [NU+] prion formation protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NEW1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1196 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKKFKDLN SFLDDQPKDP NLVASPFGGY FKNPAADAGS NNASKKSSYQ QQRNWKQGGN  60
   61 YQQGGYQSYN SNYNNYNNYN NYNNYNNYNN YNKYNGQGYQ KSTYKQSAVT PNQSGTPTPS 120
  121 ASTTSLTSLN EKLSNLELTP ISQFLSKIPE CQSITDCKNQ IKLIIEEFGK EGNSTGEKIE 180
  181 EWKIVDVLSK FIKPKNPSLV RESAMLIISN IAQFFSGKPP QEAYLLPFFN VALDCISDKE 240
  241 NTVKRAAQHA IDSLLNCFPM EALTCFVLPT ILDYLSSGAK WQAKMAALSV VDRIREDSAN 300
  301 DLLELTFKDA VPVLTDVATD FKPELAKQGY KTLLDYVSIL DNLDLSPRYK LIVDTLQDPS 360
  361 KVPESVKSLS SVTFVAEVTE PSLSLLVPIL NRSLNLSSSS QEQLRQTVIV VENLTRLVNN 420
  421 RNEIESFIPL LLPGIQKVVD TASLPEVREL AEKALNVLKE DDEADKENKF SGRLTLEEGR 480
  481 DFLLDHLKDI KADDSCFVKP YMNDETVIKY MSKILTVDSN VNDWKRLEDF LTAVFGGSDS 540
  541 QREFVKQDFI HNLRALFYQE KERADEDEGI EIVNTDFSLA YGSRMLLNKT NLRLLKGHRY 600
  601 GLCGRNGAGK STLMRAIANG QLDGFPDKDT LRTCFVEHKL QGEEGDLDLV SFIALDEELQ 660
  661 STSREEIAAA LESVGFDEER RAQTVGSLSG GWKMKLELAR AMLQKADILL LDEPTNHLDV 720
  721 SNVKWLEEYL LEHTDITSLI VSHDSGFLDT VCTDIIHYEN KKLAYYKGNL AAFVEQKPEA 780
  781 KSYYTLTDSN AQMRFPPPGI LTGVKSNTRA VAKMTDVTFS YPGAQKPSLS HVSCSLSLSS 840
  841 RVACLGPNGA GKSTLIKLLT GELVPNEGKV EKHPNLRIGY IAQHALQHVN EHKEKTANQY 900
  901 LQWRYQFGDD REVLLKESRK ISEDEKEMMT KEIDIDDGRG KRAIEAIVGR QKLKKSFQYE 960
  961 VKWKYWKPKY NSWVPKDVLV EHGFEKLVQK FDDHEASREG LGYRELIPSV ITKHFEDVGL1020
 1021 DSEIANHTPL GSLSGGQLVK VVIAGAMWNN PHLLVLDEPT NYLDRDSLGA LAVAIRDWSG1080
 1081 GVVMISHNNE FVGALCPEQW IVENGKMVQK GSAQVDQSKF EDGGNADAVG LKASNLAKPS1140
 1141 VDDDDSPANI KVKQRKKRLT RNEKKLQAER RRLRYIEWLS SPKGTPKPVD TDDEED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] MSA 1.018941 View MSA. No confident structure predictions are available.
    2 View Details [173..280] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [281..427] PSI-BLAST 6.09691 Crystal structure of the P. furiosus Rad50 ATPase domain
    4 View Details [428..498] PSI-BLAST 6.09691 Crystal structure of the P. furiosus Rad50 ATPase domain
    5 View Details [499..564] deduced N/A No confident structure predictions are available.
    6 View Details [565..767] PSI-BLAST 118.045757 Glucose transport protein GlcV, N-terminal domain
    7 View Details [768..1033] PSI-BLAST 93.679424 MsbA
    8 View Details [1034..1196] MSA 2.692976 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle