| Protein: | NEW1_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 1196 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NEW1_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1196] | [1..1196] |
|
|
0.0 | [28..1196] | [30..1191] |
|
|
0.0 | [126..1116] | [1..985] |
|
|
0.0 | [134..1131] | [4..995] |
|
|
0.0 | [126..1165] | [1..1040] |
|
|
0.0 | [128..1196] | [2..1055] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MPPKKFKDLN SFLDDQPKDP NLVASPFGGY FKNPAADAGS NNASKKSSYQ QQRNWKQGGN 60
61 YQQGGYQSYN SNYNNYNNYN NYNNYNNYNN YNKYNGQGYQ KSTYKQSAVT PNQSGTPTPS 120
121 ASTTSLTSLN EKLSNLELTP ISQFLSKIPE CQSITDCKNQ IKLIIEEFGK EG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [173-280] |
1 11 21 31 41 51
| | | | | |
1 NSTGEKIEEW KIVDVLSKFI KPKNPSLVRE SAMLIISNIA QFFSGKPPQE AYLLPFFNVA 60
61 LDCISDKENT VKRAAQHAID SLLNCFPMEA LTCFVLPTIL DYLSSGAK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.965 | 0.004 | ATPase activity, coupled to transmembrane movement of substances | a.118.9 | ENTH/VHS domain |
|
Region A: Residues: [281-427] |
1 11 21 31 41 51
| | | | | |
1 WQAKMAALSV VDRIREDSAN DLLELTFKDA VPVLTDVATD FKPELAKQGY KTLLDYVSIL 60
61 DNLDLSPRYK LIVDTLQDPS KVPESVKSLS SVTFVAEVTE PSLSLLVPIL NRSLNLSSSS 120
121 QEQLRQTVIV VENLTRLVNN RNEIESF
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 1ii8B_ |
| Description: | Crystal structure of the P. furiosus Rad50 ATPase domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [428-498] |
1 11 21 31 41 51
| | | | | |
1 IPLLLPGIQK VVDTASLPEV RELAEKALNV LKEDDEADKE NKFSGRLTLE EGRDFLLDHL 60
61 KDIKADDSCF V
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 1ii8B_ |
| Description: | Crystal structure of the P. furiosus Rad50 ATPase domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [499-564] |
1 11 21 31 41 51
| | | | | |
1 KPYMNDETVI KYMSKILTVD SNVNDWKRLE DFLTAVFGGS DSQREFVKQD FIHNLRALFY 60
61 QEKERA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [565-767] |
1 11 21 31 41 51
| | | | | |
1 DEDEGIEIVN TDFSLAYGSR MLLNKTNLRL LKGHRYGLCG RNGAGKSTLM RAIANGQLDG 60
61 FPDKDTLRTC FVEHKLQGEE GDLDLVSFIA LDEELQSTSR EEIAAALESV GFDEERRAQT 120
121 VGSLSGGWKM KLELARAMLQ KADILLLDEP TNHLDVSNVK WLEEYLLEHT DITSLIVSHD 180
181 SGFLDTVCTD IIHYENKKLA YYK
|
| Detection Method: | |
| Confidence: | 118.045757 |
| Match: | 1oxsC_ |
| Description: | Glucose transport protein GlcV, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [768-1033] |
1 11 21 31 41 51
| | | | | |
1 GNLAAFVEQK PEAKSYYTLT DSNAQMRFPP PGILTGVKSN TRAVAKMTDV TFSYPGAQKP 60
61 SLSHVSCSLS LSSRVACLGP NGAGKSTLIK LLTGELVPNE GKVEKHPNLR IGYIAQHALQ 120
121 HVNEHKEKTA NQYLQWRYQF GDDREVLLKE SRKISEDEKE MMTKEIDIDD GRGKRAIEAI 180
181 VGRQKLKKSF QYEVKWKYWK PKYNSWVPKD VLVEHGFEKL VQKFDDHEAS REGLGYRELI 240
241 PSVITKHFED VGLDSEIANH TPLGSL
|
| Detection Method: | |
| Confidence: | 93.679424 |
| Match: | 1jsqA_ |
| Description: | MsbA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1034-1196] |
1 11 21 31 41 51
| | | | | |
1 SGGQLVKVVI AGAMWNNPHL LVLDEPTNYL DRDSLGALAV AIRDWSGGVV MISHNNEFVG 60
61 ALCPEQWIVE NGKMVQKGSA QVDQSKFEDG GNADAVGLKA SNLAKPSVDD DDSPANIKVK 120
121 QRKKRLTRNE KKLQAERRRL RYIEWLSSPK GTPKPVDTDD EED
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
