YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: GGA1_YEAST

General Information:
Name(s) found: GGA1_YEAST [Swiss-Prot]
Description(s) found:
  • ADP-ribosylation factor-binding protein GGA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GGA1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQRIELTSE PVRKPRSTES SLLRKIQRAC RSTLPEPDLG LNLDVADYIN SKQGATPREA  60
   61 VLAIEKLVNN GDTQAAVFAL SLLDVLVKNC GYSIHLQISR KEFLNDLVKR FPEQPPLRYS 120
  121 KVQQMILEAI EEWYQTICKH ASYKDDLQYI NDMHKLLKYK GYTFPKVGSE NLAVLRPNDQ 180
  181 LRTPSELQEE QERAQAAKLE ELLRSGKPDD LKEANKLMKI MAGFKDDTKV AVKQAINNEL 240
  241 NKLKRKADLF NEMLTSADEP DLENEAIQEL YGDLKSAQPK FKKLIEEERD DDALVSNLSK 300
  301 FNDLVIQLLK RYKSIKGMKE EELNVPDTNE PAKELNLIDF DDDTTANTPS VTSPSKSLQP 360
  361 FDDLLGDFNK VSLSSPKSPQ ENDTVVDILG DAHSKSSGID LLDFDSQPGE SKTALSAYSN 420
  421 SIVLPNGLLN SSSNSKEITA QSQRHILNQS DHLRIDYELT RESMTKLRLV IFYSNISSDP 480
  481 ITNFALLVAS PKGTTLSLQP QSGNMLQSNS RDGIKQIASV EGISVNLGKP IKLKWKANYC 540
  541 TKGDSKEESG TTSLPTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] PSI-BLAST 171.134302 Hrs
    2 View Details [94..187] PSI-BLAST 171.134302 Hrs
    3 View Details [188..234]
    [283..409]    		 ORFEUS 7.52 Variant surface glycoprotein (N-terminal domain)
    4 View Details [235..282] ORFEUS 7.52 Variant surface glycoprotein (N-terminal domain)
    5 View Details [410..557] PSI-BLAST 35.39794 Gamma1-adaptin domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.93554535044651 bayes_pls_golite062009
  • transporter activity
    		•  1.4237388137024 bayes_pls_golite062009
  • protein binding
    		•  1.17960228368657 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle