| Protein: | GGA1_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 557 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GGA1_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..557] | [1..557] |
|
|
0.0 | [9..552] | [13..601] |
|
|
0.0 | [9..552] | [16..591] |
|
|
0.0 | [15..554] | [1..530] |
|
|
0.0 | [60..551] | [332..859] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MPQRIELTSE PVRKPRSTES SLLRKIQRAC RSTLPEPDLG LNLDVADYIN SKQGATPREA 60
61 VLAIEKLVNN GDTQAAVFAL SLLDVLVKNC GYS
|
| Detection Method: |  |
| Confidence: | 171.134302 |
| Match: | 1dvpA_ |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [94-187] |
1 11 21 31 41 51
| | | | | |
1 IHLQISRKEF LNDLVKRFPE QPPLRYSKVQ QMILEAIEEW YQTICKHASY KDDLQYINDM 60
61 HKLLKYKGYT FPKVGSENLA VLRPNDQLRT PSEL
|
| Detection Method: | |
| Confidence: | 171.134302 |
| Match: | 1dvpA_ |
| Description: | Hrs |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.93554535044651 | bayes_pls_golite062009 |
| transporter activity | 1.4237388137024 | bayes_pls_golite062009 |
| protein binding | 1.17960228368657 | bayes_pls_golite062009 |
|
Region A: Residues: [188-234] |
1 11 21 31 41 51
| | | | | |
1 QEEQERAQAA KLEELLRSGK PDDLKEANKL MKIMAGFKDD TKVAVKQ
|
|
Region B: Residues: [283-409] |
1 11 21 31 41 51
| | | | | |
1 KLIEEERDDD ALVSNLSKFN DLVIQLLKRY KSIKGMKEEE LNVPDTNEPA KELNLIDFDD 60
61 DTTANTPSVT SPSKSLQPFD DLLGDFNKVS LSSPKSPQEN DTVVDILGDA HSKSSGIDLL 120
121 DFDSQPG
|
| Detection Method: | |
| Confidence: | 7.52 |
| Match: | 1vsgA |
| Description: | Variant surface glycoprotein (N-terminal domain) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [235-282] |
1 11 21 31 41 51
| | | | | |
1 AINNELNKLK RKADLFNEML TSADEPDLEN EAIQELYGDL KSAQPKFK
|
| Detection Method: | |
| Confidence: | 7.52 |
| Match: | 1vsgA |
| Description: | Variant surface glycoprotein (N-terminal domain) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [410-557] |
1 11 21 31 41 51
| | | | | |
1 ESKTALSAYS NSIVLPNGLL NSSSNSKEIT AQSQRHILNQ SDHLRIDYEL TRESMTKLRL 60
61 VIFYSNISSD PITNFALLVA SPKGTTLSLQ PQSGNMLQSN SRDGIKQIAS VEGISVNLGK 120
121 PIKLKWKANY CTKGDSKEES GTTSLPTI
|
| Detection Method: | |
| Confidence: | 35.39794 |
| Match: | 1iu1A_ |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
