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Protein Overview: gi|23099593, gi|...

General Information:
Name(s) found: gi|23099593 [NCBI NR]
gi|22777823 [NCBI NR]
Description(s) found:
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  • gi|23099593|ref|NP_693059.1| lytic transglycosylase [Oceanobacillus iheyensis HTE831] [NCBI NR]
  • gi|22777823|dbj|BAC14094.1| lytic transglycosylase [Oceanobacillus iheyensis HTE831] [NCBI NR]
  • lytic transglycosylase [Oceanobacillus iheyensis HTE831]gi|22777823|dbj|BAC14094.1| lytic transglycosylase [Oceanobacillus iheyensis HTE831] [nrdb_11152004_Chlamydomonas]
  • lytic transglycosylase [Oceanobacillus iheyensis HTE831] [nr-271106-contam.fasta]
    • Organism: Oceanobacillus iheyensis HTE831
    Length: 225 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIFLQTAKI ELIDYKNGCD EVEINGLPQM MPFQIMSSLQ TSNSTDSLGV SFQQLLLEKI  60
   61 NEAERRTSLD FGSNLVSVPY KMQSPLNAID NSSITTNNSS VSAYQQLISN ASQKYGVDES 120
  121 LINAVIKHES NYNPNATSSA GAQGLMQLMP QTAAGLGVTN AYDPVQNINA GTKYLSQMLQ 180
  181 RYNGDNQLAL AAYNAGPGNV DKYQGIPPFR ETTAYVSKVM QSLQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] PSI-BLAST 31.0 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain; 70 kDa soluble lytic transglycosylase, SLT70

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.05278554752845 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle