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Protein Overview: gi|31711870, gi|...

General Information:
Name(s) found: gi|31711870 [NCBI NR]
gi|22655148 [NCBI NR]
gi|145333021 [NCBI NR]
Description(s) found:
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  • gi|31711870|gb|AAP68291.1| At4g12460 [Arabidopsis thaliana] [NCBI NR]
  • gi|22655148|gb|AAM98164.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|145333021|ref|NP_001078376.1| ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding [Arabidopsis thaliana] [NCBI NR]
  • At4g12460 [Arabidopsis thaliana]gi|22655148|gb|AAM98164.1| unknown protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G22540.3); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G22540.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g12460 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G22540.3); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G22540.1); similar to oxysterol-binding family protein [Arabidopsis thaliana] (TAIR:AT4G22540.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO16501.1); contains InterPro domain Oxysterol-binding protein; (InterPro:IPR000648) | chr4:7394030-7396053 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: ORP2B | OSBP(oxysterol binding protein)-related protein 2B | chr4:7394033-7396056 FORWARD LENGTH=365 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isoform 2 of Oxysterol-binding protein-related protein 2B OS=Arabidopsis thaliana GN=ORP2B [ARATH-contam.fasta]
  • Isoform of Q9SU36, Isoform 2 of Oxysterol-binding protein-related protein 2B OS=Arabidopsis thaliana GN=ORP2B [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: steroid metabolic process [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKDNVGKDL TRVCLPVYFN EPISSLQKCF EDLEYSYLLD QAYEYGKSGK SLLRALNVAA  60
   61 FAVSGYASTE GRHCKPFNPL LGETYEADFP EKGIRFFSEK VSHHPTVIAC HCEGKGWKFW 120
  121 GDTNLRSKFW GRSIQLEPVG ILTLEFDDGE IFQWSKVTTT IYNILLGKLY CDHHGIMKIR 180
  181 GNRQYSCMLK FKEQSILDRN PHQVNGFVED VTGKKAATVF GKWNDSLYYV AGDGINKASA 240
  241 SLLWKATKAP PNVTRYNFTS FAMTLNELIP GLELPPTDSR LRPDQRHLEN GEYEKANEEK 300
  301 QRLERRQRMS RQIQESGWRP RWFEPQGESE SYKYTGGYWE ARDVKSWDDC PNIFGEFTEE 360
  361 VADCA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 64.39794 Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle