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View Structure Prediction Details

Protein: gi|31711870, gi|...
Organism: Arabidopsis thaliana
Length: 365 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31711870, gi|....

Description E-value Query
Range
Subject
Range
gi|15235381, gi|... - pir||T07638 SWH1 protein homolog T1P17.50 - Arabidopsis thaliana, gi|7267948|emb|CAB78289.1| putativ...
457.0 [0..1] [365..328]
gi|57114406 - gi|57114406|gb|AAM97165.2| putative oxysterol binding protein [Oryza sativa (japonica cultivar-group...
450.0 [0..1] [363..431]

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Predicted Domain #1
Region A:
Residues: [1-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKDNVGKDL TRVCLPVYFN EPISSLQKCF EDLEYSYLLD QAYEYGKSGK SLLRALNVAA  60
   61 FAVSGYASTE GRHCKPFNPL LGETYEADFP EKGIRFFSEK VSHHPTVIAC HCEGKGWKFW 120
  121 GDTNLRSKFW GRSIQLEPVG ILTLEFDDGE IFQWSKVTTT IYNILLGKLY CDHHGIMKIR 180
  181 GNRQYSCMLK FKEQSILDRN PHQVNGFVED VTGKKAATVF GKWNDSLYYV AGDGINKASA 240
  241 SLLWKATKAP PNVTRYNFTS FAMTLNELIP GLELPPTDSR LRPDQRHLEN GEYEKANEEK 300
  301 QRLERRQRMS RQIQESGWRP RWFEPQGESE SYKYTGGYWE ARDVKSWDDC PNIFGEFTEE 360
  361 VADCA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.39794
Match: 1zhtA
Description: Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle