Protein Overview: gi|16803822

General Information:
Name(s) found:	gi\|16803822 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|16803822\|ref\|NP_465307.1\| hypothetical protein lmo1782 [Listeria monocytogenes EGD-e] [NCBI NR]
Organism:	Listeria monocytogenes EGD-e
Length:	251 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLISWNVNG LRAAVKKGFL EYFEEVDADI FCLQETKLQE GQIELDLPAY KDYWNYAVKK  60
   61 GYSGTAIFTK VEPLSVQYGL GIPEHDTEGR VITLEFEEFF MVTVYTPNSQ AELKRLDYRM 120
  121 TFEDAILEYV KNLDNTKPVV LCGDLNVAHE EIDLKNPKTN RKNAGFSDEE RAKFSAFLDA 180
  181 GFIDSFRYFY PDLTDAYSWW SYRMNARARN TGWRIDYFVV SERLKDKLVD AKIHADVLGS 240
  241 DHCPVELELN L

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..251]	PSI-BLAST	60.522879	THE CRYSTAL STRUCTURE OF THE HUMAN DNA REPAIR ENDONUCLEASE HAP1 SUGGESTS THE RECOGNITION OF EXTRA-HELICAL DEOXYRIBOSE AT DNA ABASIC SITES

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
exonuclease activity	2.70644978530491	bayes_pls_golite062009
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	2.57658637220545	bayes_pls_golite062009
deoxyribonuclease activity	2.54419310609558	bayes_pls_golite062009
hydrolase activity	2.50832753420463	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	2.36841783202726	bayes_pls_golite062009
exodeoxyribonuclease activity	1.8139951607534	bayes_pls_golite062009
exodeoxyribonuclease activity, producing 5'-phosphomonoesters	1.7967853371745	bayes_pls_golite062009
nuclease activity	1.78432551160775	bayes_pls_golite062009
catalytic activity	1.76511376991978	bayes_pls_golite062009
binding	1.74593496417303	bayes_pls_golite062009
DNA binding	0.961734136090079	bayes_pls_golite062009
nucleic acid binding	0.947430734766989	bayes_pls_golite062009
transcription regulator activity	0.597390739522692	bayes_pls_golite062009
transcription coactivator activity	0.58571720340663	bayes_pls_golite062009
protein binding	0.476649214025345	bayes_pls_golite062009
inositol or phosphatidylinositol phosphatase activity	0.228910502815798	bayes_pls_golite062009
phosphoric ester hydrolase activity	0.100365481550461	bayes_pls_golite062009
phosphatase activity	0.00559251346312178	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle