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Protein Overview: gi|42519375, gi|...

General Information:
Name(s) found: gi|42519375 [NCBI NR]
gi|41583663 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|42519375|ref|NP_965305.1| hypothetical protein LJ1503 [Lactobacillus johnsonii NCC 533] [NCBI NR]
  • gi|41583663|gb|AAS09271.1| hypothetical protein LJ_1503 [Lactobacillus johnsonii NCC 533] [NCBI NR]
    • Organism: Lactobacillus johnsonii NCC 533
    Length: 393 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEKPLYKMM LSHSFNVPVK VTYWDGKSEI YGNGTPEVEV IFNKKIPFKE ITSNASLALG  60
   61 EAYMDKDLEI KGSIQKLIEA AYESSESFMR ASKFRKFLPK QKHTEKQSQE DVQSHYDIGN 120
  121 DFYKLWLDPT MTYSCAYFTN GNKDDLEAAQ IAKVHHILQK LDPKPGKTLL DIGCGWGTLM 180
  181 LTAAKEYGLK VTGVTLSQEQ FDLVNQKIKD MGLENQAEVL LEDYRELGNR DFDYVTSVGM 240
  241 FEHVGSENLG EYFKDVAKYL KPHGVALIHG ITRQQGGATN AWINKYIFPG GYIPGLVEIV 300
  301 SRIEEANLQI ADMEMLRRHY QRTLEIWDKN FNDHRLEVEG MMGERFVRMW DMYLQACAAS 360
  361 FESGNIDVIQ YLLTKGPSGK TLPMTRQYML NDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 12.154902 Phenylalanine activating domain of gramicidin synthetase 1
    2 View Details [104..393] PSI-BLAST 28.522879 CmaA1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.62377578202456 bayes_pls_golite062009
  • transferase activity
    		•  1.20063885869845 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.14636302691827 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.12602040164126 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.535429947810431 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle