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Protein Overview: gi|31616515, gi|...

General Information:
Name(s) found: gi|42572699 [NCBI NR]
gi|31616515 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|42572699|ref|NP_974445.1| LAF3/LAF3 ISF1/LAF3 ISF2 (LONG AFTER FAR-RED 3); hydrolase [Arabidopsis thaliana] [NCBI NR]
  • gi|31616515|gb|AAP55749.1| LAF3 isoform 1 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 583 amino acids

    Gene Ontology:
    Cellular Component: perinuclear region of cytoplasm [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [IEA]
    hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGWYEFPVM IGFVSAAVFL LISVAYLPLL NDLYWSTLKS PTPPAGIVAD LLVTNGTIFT  60
   61 SDSSLPFADS MAIRNGRILK VGSFATLKGF IGDGTMEVNL EGKIVVPGLI DSHVHLISGG 120
  121 LQMAQVGLRG VSQKDEFCKM VKDAVQNAKE GSWILGGGWN NDFWGGELPS ASWIDEISPR 180
  181 NPVWLIRMDG HMALANSLAL KIAGVISLTE DPVGGTIMRM PSGEPTGLLI DAAMELVTPW 240
  241 VKEISVDERR EALFRASKYA LTRGVTTVID LGRYFPGTTD ELSWKDFQDV YLYADSSKKM 300
  301 MIRTCLFFPI TTWSRLLDLK LQKGSVLSEW LYLGGVKAFI DGSLGSNSAL FYEEYIDTPN 360
  361 NYGLEVMDPE KLSNFTMAAD KSGLQVAIHA IGDKANDMIL DMYESVAAAN GDRDRRFRIE 420
  421 HAQHLAPGSA NRFGQLHIVA SVQPDHLLDD ADSVAKKLGS ERAVKESYLF QSLLNGNALL 480
  481 ALGSDWPVAD INPLHSIRTA VKRIPPKWDH AWIPSERISF TDALIAQTIS AARAAFLDHH 540
  541 LGSLSPGKLA DFVILSTNSW DEFSKDVSAS VLATYVGGKQ LYP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..583] PSI-BLAST 21.69897 Crystal structure of D-aminoacylase in complex with 100mM CuCl2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.89663896697662 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • peptidase activity
    		•  0.531583397695361 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0416211123846697 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle