YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HSOP2_ARATH

General Information:
Name(s) found: HSOP2_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana GN=HOP2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytosol [IDA]
    plasma membrane [IDA]
    Biological Process: response to cadmium ion [IDA]
    response to stress [ISS]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEAKAKGN AAFSSGDFNS AVNHFTDAIN LTPTNHVLFS NRSAAHASLN HYDEALSDAK  60
   61 KTVELKPDWG KGYSRLGAAH LGLNQFDEAV EAYSKGLEID PSNEGLKSGL ADAKASASRS 120
  121 RASAPNPFGD AFQGPEMWSK LTADPSTRGL LKQPDFVNMM KEIQRNPSNL NLYLQDQRVM 180
  181 QALGVLLNIQ IRTQQAGDDM EIGEEEMAVP SRKEPEVEKK RKPEPEPEPE PEFGEEKQKK 240
  241 LKAQKEKELG NAAYKKKDFE TAIQHYSTAM EIDDEDISYI TNRAAVHLEM GKYDECIKDC 300
  301 DKAVERGREL RSDYKMVAKA LTRKGTALGK MAKVSKDYEP VIQTYQKALT EHRNPETLKR 360
  361 LNEAERAKKE LEQQEYYDPN IGDEEREKGN DFFKEQKYPD AVRHYTEAIK RNPKDPRAYS 420
  421 NRAACYTKLG AMPEGLKDAE KCIELDPTFL KGYSRKGAVQ FFMKEYDNAM ETYQKGLEHD 480
  481 PNNQELLDGV KRCVQQINKA NRGDLTPEEL KERQAKGMQD PEIQNILTDP VMRQVLSDLQ 540
  541 ENPAAAQKHM QNPMIMNKIQ KLISSGIVQM K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..413] PSI-BLAST 58.39794 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [414..571] PSI-BLAST 23.045757 Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.14253214573541 bayes_pls_golite062009
  • protein binding
    		•  1.83529176977066 bayes_pls_golite062009
  • signal sequence binding
    		•  1.13935627118933 bayes_pls_golite062009
  • peroxisome targeting sequence binding
    		•  0.473199490747666 bayes_pls_golite062009
  • receptor activity
    		•  0.257782742019244 bayes_pls_golite062009
  • peptide binding
    		•  0.18258303216788 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0333626369138074 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0333626369138074 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle