| Protein: | HSOP2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 571 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HSOP2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
375.0 | [0..1] | [571..45] |
|
Region A: Residues: [1-413] |
1 11 21 31 41 51
| | | | | |
1 MADEAKAKGN AAFSSGDFNS AVNHFTDAIN LTPTNHVLFS NRSAAHASLN HYDEALSDAK 60
61 KTVELKPDWG KGYSRLGAAH LGLNQFDEAV EAYSKGLEID PSNEGLKSGL ADAKASASRS 120
121 RASAPNPFGD AFQGPEMWSK LTADPSTRGL LKQPDFVNMM KEIQRNPSNL NLYLQDQRVM 180
181 QALGVLLNIQ IRTQQAGDDM EIGEEEMAVP SRKEPEVEKK RKPEPEPEPE PEFGEEKQKK 240
241 LKAQKEKELG NAAYKKKDFE TAIQHYSTAM EIDDEDISYI TNRAAVHLEM GKYDECIKDC 300
301 DKAVERGREL RSDYKMVAKA LTRKGTALGK MAKVSKDYEP VIQTYQKALT EHRNPETLKR 360
361 LNEAERAKKE LEQQEYYDPN IGDEEREKGN DFFKEQKYPD AVRHYTEAIK RNP
|
| Detection Method: |  |
| Confidence: | 58.39794 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.14253214573541 | bayes_pls_golite062009 |
| protein binding | 1.83529176977066 | bayes_pls_golite062009 |
| signal sequence binding | 1.13935627118933 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 0.473199490747666 | bayes_pls_golite062009 |
| receptor activity | 0.257782742019244 | bayes_pls_golite062009 |
| peptide binding | 0.18258303216788 | bayes_pls_golite062009 |
| signal transducer activity | 0.0333626369138074 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0333626369138074 | bayes_pls_golite062009 |
|
Region A: Residues: [414-571] |
1 11 21 31 41 51
| | | | | |
1 KDPRAYSNRA ACYTKLGAMP EGLKDAEKCI ELDPTFLKGY SRKGAVQFFM KEYDNAMETY 60
61 QKGLEHDPNN QELLDGVKRC VQQINKANRG DLTPEELKER QAKGMQDPEI QNILTDPVMR 120
121 QVLSDLQENP AAAQKHMQNP MIMNKIQKLI SSGIVQMK
|
| Detection Method: | |
| Confidence: | 23.045757 |
| Match: | 2fo7A |
| Description: | Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form) |
Matching Structure (courtesy of the PDB): |
|
