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Protein Overview: PUS3_ARATH

General Information:
Name(s) found: PUS3_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana GN=At1g78910 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pseudouridine synthesis [IEA]
    Molecular Function: pseudouridine synthase activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKAKTCFRQ IYLTVLIRRY SRVAPPPSSV IRVTNNVAHL GPPKQGPLPR QLISLPPFPG  60
   61 HPLPGKNAGA DGDDGDSGGH VTAISWVKYY FEEIYDKAIQ THFTKGLVQM EFRGRRDASR 120
  121 EKEDGAIPMR KIKHNEVMQI GDKIWLPVSI AEMRISKRYD TIPSGTLYPN ADEIAYLQRL 180
  181 VRFKDSAIIV LNKPPKLPVK GNVPIHNSMD ALAAAALSFG NDEGPRLVHR LDRETSGLLV 240
  241 MGRTKESIDY LHSVFSDYKG RNSSCKAWNK ACEAMYQQYW ALVIGSPKEK EGLISAPLSK 300
  301 VLLDDGKTDR VVLAQGSGFE ASQDAITEYK VLGPKINGCS WVELRPITSR KHQLRVHCAE 360
  361 ALGTPIVGDY KYGWFVHKRW KQMPQVDIEP TTGKPYKLRR PEGLDVQKGS VLSKVPLLHL 420
  421 HCREMVLPNI AKFLHVMNQQ ETEPLHTGII DKPDLLRFVA SMPSHMKISW NLMSSYLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 4.09691 No description for 2uu9D was found.
    2 View Details [81..478] PSI-BLAST 66.221849 Structure of the catalytic domain of 23S rRNA pseudouridine synthase RluD

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • pseudouridine synthase activity
    		•  5.60483019625575 bayes_pls_golite062009
  • intramolecular transferase activity
    		•  4.62815459483632 bayes_pls_golite062009
  • isomerase activity
    		•  3.43067391737824 bayes_pls_golite062009
  • catalytic activity
    		•  2.39224964671205 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle