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Protein Overview: gi|52353423, gi|...

General Information:
Name(s) found: gi|52353423 [NCBI NR]
gi|215740740 [NCBI NR]
gi|215700980 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|52353423|gb|AAU43991.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215740740|dbj|BAG97396.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215700980|dbj|BAG92404.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 426 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILRVSVMR LVVAAMAVAA GVLFFSGAGE ARVLLTLDDF GAVGDGITND TQAFLDAWNA  60
   61 ACASTEPAVL AVPAGKTYQI WPVRLAGPCK KKLKLMISGT IAAPASPDEW AGRDPTKWLY 120
  121 VFRVDDLSVS GGGTIDGMGA EWWARSCKRK KTKPCSTVSA PKALQFEECR RVSVQGITMQ 180
  181 NGPQFHLMFT RCTDVKASFL RVVAPESSPN TDGIHLNDTT HAQIMDNLIS TGDDCVSMVG 240
  241 NCSDVRVKDI SCGPGHGISI GSLGKNRTTD RIENVRVDTC LLTNTTNGVR IKSWQGGMGY 300
  301 AHNLRFEGIV MKNVSNPIII DQYYCDQPTP CANQTQAVEV RKIEFAGIRG TSATEQAIKL 360
  361 ACSDAVPCRD LELRNVNLTM VGGGAASAFC HRASGKAAGA VVPASCLAKA PHRMLGDATP 420
  421 AARVGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..426] PSI-BLAST 44.522879 RHAMNOGALACTURONASE A FROM ASPERGILLUS ACULEATUS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • polygalacturonase activity
    		•  3.63113788404352 bayes_pls_golite062009
  • catalytic activity
    		•  0.67288476528593 bayes_pls_golite062009
  • hydrolase activity
    		•  0.329563804802467 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle