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Protein Overview: PLET2_ARATH

General Information:
Name(s) found: PLET2_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: nucleus [NAS]
    Biological Process: root development [IGI][IMP]
    stem cell maintenance [IMP]
    regulation of transcription, DNA-dependent [ISS]
    pattern specification process [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNNWLAFP LSPTHSSLPP HIHSSQNSHF NLGLVNDNID NPFQNQGWNM INPHGGGGEG  60
   61 GEVPKVADFL GVSKSGDHHT DHNLVPYNDI HQTNASDYYF QTNSLLPTVV TCASNAPNNY 120
  121 ELQESAHNLQ SLTLSMGSTG AAAAEVATVK ASPAETSADN SSSTTNTSGG AIVEATPRRT 180
  181 LETFGQRTSI YRGVTRHRWT GRYEAHLWDN SCRREGQSRK GRQVYLGGYD KEEKAARAYD 240
  241 LAALKYWGPS TTTNFPITNY EKEVEEMKNM TRQEFVASIR RKSSGFSRGA SMYRGVTRHH 300
  301 QHGRWQARIG RVAGNKDLYL GTFSTEEEAA EAYDIAAIKF RGLNAVTNFE INRYDVKAIL 360
  361 ESNTLPIGGG AAKRLKEAQA LESSRKREEM IALGSNFHQY GAASGSSSVA SSSRLQLQPY 420
  421 PLSIQQPFEH LHHHQPLLTL QNNNDISQYH DSFSYIQTQL HLHQQQTNNY LQSSSHTSQL 480
  481 YNAYLQSNPG LLHGFVSDNN NTSGFLGNNG IGIGSSSTVG SSAEEEFPAV KVDYDMPPSG 540
  541 GATGYGGWNS GESAQGSNPG GVFTMWNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] deduced N/A No confident structure predictions are available.
    2 View Details [176..262] FFAS03 4.79 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    3 View Details [263..364] PSI-BLAST 22.0 GCC-box binding domain
    4 View Details [365..568] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.236830846471166 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle