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Protein Overview: ELF6_ARATH

General Information:
Name(s) found: ELF6_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Probable lysine-specific demethylase ELF6 OS=Arabidopsis thaliana GN=ELF6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1340 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: unidimensional cell growth [IMP]
    negative regulation of short-day photoperiodism, flowering [IMP]
    histone H3-K9 demethylation [IMP]
    negative regulation of long-day photoperiodism, flowering [IMP]
    response to brassinosteroid stimulus [IMP]
    regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVEIPNWL KALPLAPVFR PTDTEFADPI AYISKIEKEA SAFGICKIIP PLPKPSKKYV  60
   61 FYNLNKSLLK CPELVSDVDI SKVCKEDRAV FTTRQQELGQ TVKKNKGEKG KSNSQRSGVK 120
  121 QVWQSGGVYT LDQFEAKSKA FYKTQLGTVK ELAPVVIEAL FWKAALEKPI YIEYANDVPG 180
  181 SAFGEPEDHF RHFRQRKRRG RGFYQRKTEN NDPSGKNGEK SSPEVEKAPL ASTSLSSQDS 240
  241 SKQKNMDIVD EMEGTAGWKL SNSSWNLQMI ARSPGSVTRF MPDDIPGVTS PMVYIGMLFS 300
  301 WFAWHVEDHE LHSMNYLHTG SPKTWYAVPC DYALDFEEVI RKNSYGRNID QLAALTQLGE 360
  361 KTTLVSPEMI VASGIPCCRL VQNPGEFVVT FPRSYHVGFS HGFNCGEAAN FGTPQWLNVA 420
  421 KEAAVRRAAM NYLPMLSHQQ LLYLLTMSFV SRVPRSLLPG GRSSRLRDRQ REEREFLVKR 480
  481 AFVEDILNEN KNLSVLLREP GSRLVMWDPD LLPRHSALAL AAAGVAGASA VSPPAVAKKE 540
  541 LEEGHSELQN KEKTSLLEEL SLFMEKLNDV YYDDDDGLLN DFQVDTGTLP CVACGVLGFP 600
  601 FMSVVQPSEK ALKDLSERQG ETDAQEIMTL SSEKSDCEWK TSSRYIRPRI FCLEHTIELQ 660
  661 RLLQSRGGLK FLVICHKDFQ KFKAHAAIVA EEVKVPFSYD DVLLESASQE ELSLIDLAIE 720
  721 DEEKYEHSVD WTSELGINLR YCVKVRKNSP TKKIQHALSL GGLFSDTSQM LDFTTIRWLQ 780
  781 RKSRSKAKPS STSSFTPCEH LEVKADGKLR DNLDSQTGKK EEKIIQYSRK KKLNPKPSAE 840
  841 QVQELATLAK SKDFDKTCKN FSSRSHLDSA IRSEMNSEIG DSGRVIGVSF SINPCSSSFT 900
  901 VGHGQEHPEI TVKFGSDLDG NVTNSLSMVN GDSADLTLTS ISREQHQGHS MTSNNNGSNS 960
  961 GSHVVASQTI LVSTGDNHDG PRKLSGDYVC SDVSVRGIQE AVEMSDQEFG EPRSTVTNIE1020
 1021 DEQQSQIVKP TQREAVFGDH EQVEGAEAVS TRENLCSEII LHTEHSSAHV GMEIPDINTA1080
 1081 SENLVVDMTH DGEPLESSDI LSSSNGDEAS SNGLQVLNDE LSMESEVSSS ENTEVIEAPN1140
 1141 SMGEAKKKRK IESESETNDN PESSIGFIRS PCEGLRSRGK RKATCETSLK HTETSDEEKK1200
 1201 PIAKRLKKTP KACSGSRQQE VPTTTHPNRC YLEGCKMTFE SKAKLQTHKR NRCTHEGCGK1260
 1261 KFRAHKYLVL HQRVHKDERP FECSWKGCSM TFKWQWARTE HLRLHTGERP YICKVDGCGL1320
 1321 SFRFVSDYSR HRRKTMHYVT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] PSI-BLAST 6.39794 No description for 2e6rA was found.
    2 View Details [111..513] PSI-BLAST 107.0 No description for 2oq6A was found.
    3 View Details [514..707] deduced N/A No confident structure predictions are available.
    4 View Details [708..785] MSA 2.443991 View MSA. No confident structure predictions are available.
    5 View Details [786..929] PSI-BLAST 25.30103 Designed zinc finger protein
    6 View Details [930..1079] PSI-BLAST 16.09691 No description for 2dlqA was found.
    7 View Details [1080..1160] deduced N/A No confident structure predictions are available.
    8 View Details [1161..1340] PSI-BLAST 63.154902 No description for 2i13A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle