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Protein Overview: AROC_ARATH

General Information:
Name(s) found: AROC_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|83300489|sp|P57720.2|AROC_ARATH RecName: Full=Chorismate synthase, chloroplastic; AltName: Full=5-enolpyruvylshikimate-3-phosphate phospholyase; AltName: Full=Protein EMBRYO DEFECTIVE 1144; Flags: Precursor [NCBI NR]
  • gi|53749180|gb|AAU90075.1| At1g48850 [Arabidopsis thaliana] [NCBI NR]
  • gi|18402389|ref|NP_564534.1| EMB1144 (embryo defective 1144); chorismate synthase [Arabidopsis thaliana] [NCBI NR]
  • gi|15982824|gb|AAL09759.1| At1g48850/T24P22_3 [Arabidopsis thaliana] [NCBI NR]
  • gi|110742465|dbj|BAE99151.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Chorismate synthase, chloroplastic OS=Arabidopsis thaliana GN=EMB1144 PE=2 SV=2 [Swiss-Prot]
  • At1g48850 [Arabidopsis thaliana]gi|15982824|gb|AAL09759.1| At1g48850/T24P22_3 [Arabidopsis thaliana]gi|18402389|ref|NP_564534.1| chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Chorismate synthase, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EMB1144 | EMB1144 (EMBRYO DEFECTIVE 1144); chorismate synthase | chr1:18068822-18071624 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Chorismate synthase, chloroplast precursor (5-enolpyruvylshikimate-3-phosphate phospholyase) [nr-271106-contam.fasta]
  • At1g48850 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • EMB1144; chorismate synthase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g48850/T24P22_3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EMB1144 | chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative | chr1:18065154-18067956 REVERSE LENGTH=436 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 436 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    nucleolus [IDA]
    Biological Process: aromatic amino acid family biosynthetic process [TAS]
    embryonic development ending in seed dormancy [NAS]
    Molecular Function: chorismate synthase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLTSKS ILGSTKLGSS SLPSELRRLS SPAVQISLRT QTRKNFQIQA TGSSYGTHFR  60
   61 VSTFGESHGG GVGCIIDGCP PRIPLTESDL QFDLDRRRPG QSRITTPRKE TDTCRISSGV 120
  121 SEGMTTGTPI HVFVPNTDQR GLDYSEMSVA YRPSHADATY DMKYGVRSVQ GGGRSSARET 180
  181 IGRVAPGALA KKILKQFAGT EILAYVSQVH HVVLPEELVD HENLTLEQIE NNIVRCPNPE 240
  241 YAEKMIAAID AVRTKGNSVG GVVTCIVRNA PRGLGTPVFD KLEAELAKAC MSLPATKGFE 300
  301 FGSGFAGTFL TGLEHNDEFY TDENGRIRTR TNRSGGIQGG ISNGEIINMR VAFKPTSTIG 360
  361 RKQNTVTRDK VETEMIARGR HDPCVVPRAV PMVEAMVALV LVDQLMAQYA QCHLFPINPE 420
  421 LQEPLQIEQP QNATAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..436] PSI-BLAST 157.0 Crystal structure of the bifunctional chorismate synthase from Saccharomyces cerevisiae

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chorismate synthase activity
    		•  5.15976990017342 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
    		•  4.26558071446785 bayes_pls_golite062009
  • catalytic activity
    		•  1.94308403509017 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.59965915025616 bayes_pls_golite062009
  • lyase activity
    		•  1.53765291169529 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle