YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30725698, gi|...

General Information:
Name(s) found: gi|30725698 [NCBI NR]
gi|30692743 [NCBI NR]
gi|27311599 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|30725698|gb|AAP37871.1| At5g35400 [Arabidopsis thaliana] [NCBI NR]
  • gi|30692743|ref|NP_198390.2| tRNA pseudouridine synthase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|27311599|gb|AAO00765.1| putative protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 420 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pseudouridine synthesis [IEA]
    tRNA processing [IEA]
    Molecular Function: pseudouridine synthase activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRVYVHYH HADACSKARW NARETFRFMY DRPWQHVLDF YSNAVEGNLS VLSLFQPKKS  60
   61 LVHDDGITEE MLLESEPETS TRKDGRSGRW ERVNFKIVLS YNGASFDGWQ KQPDLHTVQG 120
  121 VVEKSLGGFV DERKAQLLKK KCKPLEGRVL VAGRTDKGVS ALNQVCSFYT WRKDIEPIAI 180
  181 EDAINKDASG KLRVVSISKV SRSFHPNFSA KWRRYLYIFP LDDAEPLRKS GENHENFIFD 240
  241 ENKKKQRNGL LSEEIAEEVI MSEDDELEIE ETSNALEVVE KPSDFSVSKV DQLLQHLQGK 300
  301 VLSYKMFARD TKAARNEGPP TECFMYHARA AEIRLSSSDC VEGRRVMCVE LVANRFLRKM 360
  361 VRVLVATSIR EAAAGAEDDA LLKLLEASCR RATAPPAPSE GLCLFDVGYT DFDPQTSLIS 420
  421

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] deduced N/A No confident structure predictions are available.
    2 View Details [91..420] PSI-BLAST 79.522879 No description for 2nqpA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle