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Protein Overview: gi|30725316, gi|...

General Information:
Name(s) found: gi|42569807 [NCBI NR]
gi|30725316 [NCBI NR]
gi|110736015 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|42569807|ref|NP_181589.3| initiator tRNA phosphoribosyl transferase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30725316|gb|AAP37680.1| At2g40570 [Arabidopsis thaliana] [NCBI NR]
  • gi|110736015|dbj|BAE99980.1| putative initiator tRNA phosphoribosyl-transferase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 521 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of translation [ISS]
    Molecular Function: transferase activity, transferring pentosyl groups [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAKSEEPMM TTRDSIYRAA RNIKRRDNSL YNALRSIYQD SIFVHEISLL WPKLPLVANL  60
   61 RCGLWYSEKF DATCYFKSTD GHTNNLSFNT SRLNLHLPLL AGEKGGCIII DSTRKGKRFP 120
  121 DSMSKTIPMW SCVVNRSIFN HWNRLCNIDA GLTSDDDGDN IRKLLDKWDC SLHLPLWVSN 180
  181 TERASIEARL DEWTRELDES GADIASLASC LRKPLRPLWV SQKTVIWLNE VPEHDSWDFT 240
  241 PLILVSASAS GELQNRTSSE FSWNYIPGAG DDEESWARGL SPNVFWTHVD DLIHSGPDLC 300
  301 NQKVAEIVEN DRVYRAHRGQ EAPQVVVKCS KSNGGVNHAK SDEILCLSAQ IPKVDEERLV 360
  361 FWLSSTNLAV GASQVACKET SIDCILNCDQ NPISVPVSYL EEHLHLPMKG SKFDRFSISR 420
  421 NLPPAVNFAK LKMSSGKKVL VCCQDGEDIS ICVCLAILMS LFNEEGAFDG GKSFEEKSIT 480
  481 KMDMRRMLIF ICKYAVNARP SRGNLKQVFG FLSSHRENSD E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] deduced N/A No confident structure predictions are available.
    2 View Details [232..342] deduced N/A No confident structure predictions are available.
    3 View Details [343..521] FFAS03 1.08 No description for 2j17A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle