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Protein Overview: acd-1

General Information:
Name(s) found: acd-1 / CE37320 [WormBase]
Description(s) found:
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  • WBGene00016064 locus:acd-1 status:Partially_confirmed UniProt:P91102 protein_id:CCD63873.1 [WormBase]
  • gi|71980907|ref|NP_491295.2| hypothetical protein C24G7.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|51988169|gb|AAB42338.2| Hypothetical protein C24G7.2 [Caenorhabditis elegans] [NCBI NR]
  • Hypothetical protein C24G7.2 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE37320 WBGene00016064 status:Partially_confirmed TR:P91102 protein_id:AAB42338.2 [wormpep150.fasta]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • 37320 WBGene00016064 status:Partially_confirmed TR:P91102 protein_id:AAB42338.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE37320 WBGene00016064 status:Partially_confirmed UniProt:P91102_CAEEL protein_id:AAB42338.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE37320 WBGene00016064 status:Partially_confirmed UniProt:P91102_CAEEL protein_id:AAB42338.2| [wormORF-contam.fasta]
  • C24G7.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE37320 WBGene00016064 locus:acd-1 status:Partially_confirmed UniProt:P91102 protein_id:AAB42338.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE37320 WBGene00016064 locus:acd-1 status:Partially_confirmed UniProt:P91102 protein_id:CCD63873.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=acd-1 PE=3 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 635 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    sodium channel activity [IEALink to PubMed article]
    amiloride-sensitive sodium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPTLSPNYR NEAFEHDDSY LVNFVAGSSS GESSTPPPSF VPKCNFRYNQ SRSQMIIEVP  60
   61 VAQLKKLRKL EGTVSIKRET QHFCETTTMH GPKRIFQGKR WATLFWLIMV SCSLGLLITQ 120
  121 VFILASEYLS KPTVSDVSFL INEDGMDFPL ITICNLNPIR KTYVNEINKT GEVSPPMINY 180
  181 MMKWFTEIPT LIGGADRPTL HEGNEELKLY MKNHLNFTVD SFFMNSGFSC PDIFKLCSFQ 240
  241 GEIFDCCTLS TEVLTPLGKC FTLDLSSSTK ASMHKQTEPG IQAGLAITLD AHLEEQFDGS 300
  301 NGMDALFTNS FVNGFRYFVH PPNTIPHLSS DEFTVSPNTV AFSAISSDRY VLLPTHQWGN 360
  361 CTENFPDGIQ SNLSYSSGNC LSLCKAKFYM ENCGCTPALY NIENNLKECT PYETTTCLDN 420
  421 ILAKPNKETG KIEFQTPNCK ACAQQCNSLV YRAYNSYGSQ FSAGAFHYLK SINPEWTDGH 480
  481 MRANFQMINI FYRDMSYTEY NQVQDASVTQ LLSDIGGNMG MFLGMSVITI TEICLFFSKM 540
  541 FWLGFSKKRR DYMYSKRVNE KTHEREVCET VEKMKAIASQ GNLSSIAGTT SAKNSIPNDN 600
  601 VEFRINLKDL ADQLDSDSGY SQNQPDSRNA SFQKY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] deduced N/A No confident structure predictions are available.
    2 View Details [67..561] PSI-BLAST 107.0 No description for 2qtsA was found.
    3 View Details [562..635] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle